RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 HINFPQ9BQA5 517 aa16.97■□□□□ 0.31
CLK3-207ENST00000562389 CINPQ9BW66 212 aaPredicted RBP16.97■□□□□ 0.31
CLK3-207ENST00000562389 OSBPL1AQ9BXW6 950 aa16.97■□□□□ 0.31
CLK3-207ENST00000562389 ARRDC1-AS1Q9H2J1 176 aa16.97■□□□□ 0.31
CLK3-207ENST00000562389 DYRK4Q9NR20 520 aa16.97■□□□□ 0.31
CLK3-207ENST00000562389 DTLQ9NZJ0 730 aa16.97■□□□□ 0.31
CLK3-207ENST00000562389 GPR179Q6PRD1 2367 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 ANKRD36A6QL64 1941 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 SDK1Q7Z5N4 2213 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 METTL12A8MUP2 240 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 KRIT1O00522 736 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 PLRG1O43660 514 aaKnown RBP16.96■□□□□ 0.31
CLK3-207ENST00000562389 ITGB7P26010 798 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 MPLP40238 635 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 CSNK1DP48730 415 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 RENBPP51606 427 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 ADPRHP54922 357 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 CREB5Q02930 508 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 CCDC15Q0P6D6 951 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 CNTN1Q12860 1018 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 SLC10A2Q12908 348 aaPredicted RBP16.96■□□□□ 0.31
CLK3-207ENST00000562389 GSE1Q14687 1217 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 POM121L1PQ3SYA9 428 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 TFDP3Q5H9I0 405 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 PLA2G2CQ5R387 149 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 PIP5KL1Q5T9C9 394 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 PEAR1Q5VY43 1037 aaPredicted RBP16.96■□□□□ 0.31
CLK3-207ENST00000562389 TIGD7Q6NT04 549 aaPredicted RBP16.96■□□□□ 0.31
CLK3-207ENST00000562389 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.96■□□□□ 0.31
CLK3-207ENST00000562389 RFX6Q8HWS3 928 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 NSMCE1Q8WV22 266 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 FATE1Q969F0 183 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 HDAC11Q96DB2 347 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 EXOC2Q96KP1 924 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 ZNF830Q96NB3 372 aaPredicted RBP16.96■□□□□ 0.31
CLK3-207ENST00000562389 TSGA13Q96PP4 275 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 PSKH2Q96QS6 385 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 HDAC8Q9BY41 377 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 CPEB1Q9BZB8 566 aaKnown RBP16.96■□□□□ 0.31
CLK3-207ENST00000562389 KDM4CQ9H3R0 1056 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 C6orf106Q9H6K1 298 aaPredicted RBP16.96■□□□□ 0.31
CLK3-207ENST00000562389 SEPT3Q9UH03 358 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 AMFRQ9UKV5 643 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 GUCA1BQ9UMX6 200 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 CAPN6Q9Y6Q1 641 aa16.96■□□□□ 0.31
CLK3-207ENST00000562389 hCG_1818297A0A087WSY0 165 aa16.95■□□□□ 0.3
CLK3-207ENST00000562389 LRRC72A6NJI9 287 aa16.95■□□□□ 0.3
CLK3-207ENST00000562389 MEI4A8MW99 385 aa16.95■□□□□ 0.3
CLK3-207ENST00000562389 C10orf142B7Z368 130 aa16.95■□□□□ 0.3
CLK3-207ENST00000562389 PLK4O00444 970 aa16.95■□□□□ 0.3
CLK3-207ENST00000562389 MAP3K6O95382 1288 aa16.95■□□□□ 0.3
CLK3-207ENST00000562389 CCNCP24863 283 aa16.95■□□□□ 0.3
CLK3-207ENST00000562389 HOXD11P31277 338 aaPredicted RBP16.95■□□□□ 0.3
CLK3-207ENST00000562389 GKP32189 559 aa16.95■□□□□ 0.3
CLK3-207ENST00000562389 HOXD12P35452 270 aa16.95■□□□□ 0.3
CLK3-207ENST00000562389 HSPA9P38646 679 aaKnown RBP16.95■□□□□ 0.3
CLK3-207ENST00000562389 COPS2P61201 443 aa16.95■□□□□ 0.3
CLK3-207ENST00000562389 NSUN2Q08J23 767 aaKnown RBP eCLIP16.95■□□□□ 0.3
CLK3-207ENST00000562389 SLC10A7Q0GE19 358 aa16.95■□□□□ 0.3
CLK3-207ENST00000562389 TFDP2Q14188 446 aa16.95■□□□□ 0.3
CLK3-207ENST00000562389 GRM3Q14832 879 aa16.95■□□□□ 0.3
CLK3-207ENST00000562389 PPP2R5EQ16537 467 aa16.95■□□□□ 0.3
CLK3-207ENST00000562389 WDR45BQ5MNZ6 344 aa16.95■□□□□ 0.3
CLK3-207ENST00000562389 SYCP2LQ5T4T6 812 aa16.95■□□□□ 0.3
CLK3-207ENST00000562389 DCAF12L1Q5VU92 463 aa16.95■□□□□ 0.3
CLK3-207ENST00000562389 ERN2Q76MJ5 926 aaKnown RBP16.95■□□□□ 0.3
CLK3-207ENST00000562389 PEX26Q7Z412 305 aa16.95■□□□□ 0.3
CLK3-207ENST00000562389 SYT12Q8IV01 421 aa16.95■□□□□ 0.3
CLK3-207ENST00000562389 CCDC50Q8IVM0 306 aa16.95■□□□□ 0.3
CLK3-207ENST00000562389 BBS5Q8N3I7 341 aa16.95■□□□□ 0.3
CLK3-207ENST00000562389 DCLK2Q8N568 766 aa16.95■□□□□ 0.3
CLK3-207ENST00000562389 GPR161Q8N6U8 529 aaKnown RBP16.95■□□□□ 0.3
CLK3-207ENST00000562389 TSEN2Q8NCE0 465 aaKnown RBP16.95■□□□□ 0.3
CLK3-207ENST00000562389 OR2T34Q8NGX1 318 aa16.95■□□□□ 0.3
CLK3-207ENST00000562389 OR14C36Q8NHC7 312 aa16.95■□□□□ 0.3
CLK3-207ENST00000562389 EVLQ9UI08 416 aaPredicted RBP16.95■□□□□ 0.3
CLK3-207ENST00000562389 PILRBQ9UKJ0 227 aa16.95■□□□□ 0.3
CLK3-207ENST00000562389 MIF4GDA9UHW6 222 aaKnown RBP16.94■□□□□ 0.3
CLK3-207ENST00000562389 TGM2P21980 687 aa16.94■□□□□ 0.3
CLK3-207ENST00000562389 TGM1P22735 817 aa16.94■□□□□ 0.3
CLK3-207ENST00000562389 ITPKAP23677 461 aa16.94■□□□□ 0.3
CLK3-207ENST00000562389 RGRP47804 291 aa16.94■□□□□ 0.3
CLK3-207ENST00000562389 PEX5P50542 639 aa16.94■□□□□ 0.3
CLK3-207ENST00000562389 NEK3P51956 506 aa16.94■□□□□ 0.3
CLK3-207ENST00000562389 RWDD2BP57060 319 aa16.94■□□□□ 0.3
CLK3-207ENST00000562389 SPEM2Q0P670 501 aa16.94■□□□□ 0.3
CLK3-207ENST00000562389 HNRNPDQ14103 355 aaKnown RBP16.94■□□□□ 0.3
CLK3-207ENST00000562389 ZNF235Q14590 738 aa16.94■□□□□ 0.3
CLK3-207ENST00000562389 CSRP2Q16527 193 aa16.94■□□□□ 0.3
CLK3-207ENST00000562389 ZNF805Q5CZA5 627 aa16.94■□□□□ 0.3
CLK3-207ENST00000562389 KIAA0895LQ68EN5 471 aa16.94■□□□□ 0.3
CLK3-207ENST00000562389 NCEH1Q6PIU2 408 aa16.94■□□□□ 0.3
CLK3-207ENST00000562389 GDPD4Q6W3E5 623 aa16.94■□□□□ 0.3
CLK3-207ENST00000562389 TEX26Q8N6G2 289 aa16.94■□□□□ 0.3
CLK3-207ENST00000562389 UBE2Q2Q8WVN8 375 aa16.94■□□□□ 0.3
CLK3-207ENST00000562389 DNASE2BQ8WZ79 361 aa16.94■□□□□ 0.3
CLK3-207ENST00000562389 MAML1Q92585 1016 aa16.94■□□□□ 0.3
CLK3-207ENST00000562389 PIGKQ92643 395 aa16.94■□□□□ 0.3
CLK3-207ENST00000562389 OLFM3Q96PB7 478 aa16.94■□□□□ 0.3
CLK3-207ENST00000562389 TUBGCP5Q96RT8 1024 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms