RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 ATP6V1B1P15313 513 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 VCLP18206 1134 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 MPSTP25325 297 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 PCSK6P29122 969 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 SERPINB5P36952 375 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 AVPR1AP37288 418 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 CLCNKBP51801 687 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 PGGT1BP53609 377 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 EMP3P54852 163 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 CCNIQ14094 377 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 PDK3Q15120 406 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 PGM2L1Q6PCE3 622 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 PGAP3Q96FM1 320 aaPredicted RBP11.12□□□□□ -0.63
NEIL1-202ENST00000561643 OXSMQ9NWU1 459 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 RRN3Q9NYV6 651 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 POMPQ9Y244 141 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 SSX2IPQ9Y2D8 614 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 APOA4P06727 396 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 UQCRBP14927 111 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 PEX2P28328 305 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 HOXD11P31277 338 aaPredicted RBP11.12□□□□□ -0.63
NEIL1-202ENST00000561643 AFF1P51825 1210 aaKnown RBP11.12□□□□□ -0.63
NEIL1-202ENST00000561643 BTG3Q14201 252 aaPredicted RBP11.12□□□□□ -0.63
NEIL1-202ENST00000561643 FAM110CQ1W6H9 321 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 TMEM86AQ8N2M4 240 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 SMARCD1Q96GM5 515 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 GRIP2Q9C0E4 1043 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 SIK2Q9H0K1 926 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 WDR55Q9H6Y2 383 aaPredicted RBP11.12□□□□□ -0.63
NEIL1-202ENST00000561643 PFDN4Q9NQP4 134 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 TMEM98Q9Y2Y6 226 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 NUP205Q92621 2012 aa11.12□□□□□ -0.63
NEIL1-202ENST00000561643 THP07101 528 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 PRDX6P30041 224 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 GRIA4P48058 902 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 CXCR3P49682 368 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 CPT1AP50416 773 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 DCTN2Q13561 401 aaKnown RBP11.11□□□□□ -0.63
NEIL1-202ENST00000561643 RAB41Q5JT25 222 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 METTL21CQ5VZV1 264 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 ADGRG6Q86SQ4 1221 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 LINC00523Q86TU6 105 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 FBXW8Q8N3Y1 598 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 TMCO5AQ8N6Q1 288 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 LENG8Q96PV6 779 aaPredicted RBP11.11□□□□□ -0.63
NEIL1-202ENST00000561643 RHOJQ9H4E5 214 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 NSMCE4AQ9NXX6 385 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 WDR37Q9Y2I8 494 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 C15orf38-AP3S2A0A0A6YYH1 394 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 MYOCOSA0A1B0GUC4 107 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 CASTOR2A6NHX0 329 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 AIM2O14862 343 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 PIGNO95427 931 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 SMIM18P0DKX4 95 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 HADHAP40939 763 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 CCR10P46092 362 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 NADK2Q4G0N4 442 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 LIPMQ5VYY2 423 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 SEL1L3Q68CR1 1132 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 KLHL35Q6PF15 583 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 GET4Q7L5D6 327 aaPredicted RBP11.11□□□□□ -0.63
NEIL1-202ENST00000561643 ARPINQ7Z6K5 226 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 TAC4Q86UU9 113 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 ZC3HC1Q86WB0 502 aaKnown RBP11.11□□□□□ -0.63
NEIL1-202ENST00000561643 SPATA22Q8NHS9 363 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 LPPQ93052 612 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 PRICKLE1Q96MT3 831 aaPredicted RBP11.11□□□□□ -0.63
NEIL1-202ENST00000561643 GPR22Q99680 433 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 AP5M1Q9H0R1 490 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 CDH9Q9ULB4 789 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 RUVBL2Q9Y230 463 aaKnown RBP11.11□□□□□ -0.63
NEIL1-202ENST00000561643 ANKRD6Q9Y2G4 727 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 RAP2CQ9Y3L5 183 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 PTCH2Q9Y6C5 1203 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 TRIP12Q14669 1992 aaPredicted RBP11.11□□□□□ -0.63
NEIL1-202ENST00000561643 AP3B1O00203 1094 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 HAS3O00219 553 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 HDAC3O15379 428 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 NFKBIAP25963 317 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 EPHA3P29320 983 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 NUDT2P50583 147 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 RPL14P50914 215 aaKnown RBP11.11□□□□□ -0.63
NEIL1-202ENST00000561643 ZNF135P52742 658 aaPredicted RBP11.11□□□□□ -0.63
NEIL1-202ENST00000561643 CHN2P52757 468 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 NAGLUP54802 743 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 GRM2Q14416 872 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 POU6F1Q14863 301 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 CCDC92Q53HC0 331 aaPredicted RBP11.11□□□□□ -0.63
NEIL1-202ENST00000561643 FBXL19Q6PCT2 694 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 PAOXQ6QHF9 649 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 ZYG11AQ6WRX3 759 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 RNF111Q6ZNA4 994 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 METTL25Q8N6Q8 603 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 CNTD1Q8N815 330 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 SMYD1Q8NB12 490 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 IPMKQ8NFU5 416 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 KCTD4Q8WVF5 259 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 MYLPFQ96A32 169 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 RTKNQ9BST9 563 aa11.11□□□□□ -0.63
NEIL1-202ENST00000561643 HEMK1Q9Y5R4 338 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms