RNA–Protein interactions for RNA: ENST00000561642.1

AC133561.2-202, humanhuman

TSL 1 (best) BASIC

Gene AC133561.2, Length 1,301 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC133561.2-202ENST00000561642 SEMA4FO95754 770 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 IL1BP01584 269 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 PRNPP04156 253 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 ACADMP11310 421 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 TIMP2P16035 220 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 ITGB7P26010 798 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 MAOBP27338 520 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 ARL4AP40617 200 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 PSMD8P48556 350 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 MARCKSL1P49006 195 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 LIMK1P53667 647 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 GSDMDP57764 484 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 IRX4P78413 519 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 GBE1Q04446 702 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 SF3A2Q15428 464 aaKnown RBP9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 TMEM259Q4ZIN3 620 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 ATXN7L2Q5T6C5 722 aaPredicted RBP9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 FAM46CQ5VWP2 391 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 LYSMD4Q5XG99 296 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 KIAA0895LQ68EN5 471 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 NEK5Q6P3R8 708 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 NCEH1Q6PIU2 408 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 TMCO3Q6UWJ1 677 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 MFSD7Q6UXD7 560 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 DBX2Q6ZNG2 339 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 PRR23CQ6ZRP0 262 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 DSG4Q86SJ6 1040 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 NT5DC3Q86UY8 548 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 ZSWIM9Q86XI8 627 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 KATNAL2Q8IYT4 538 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 KCTD6Q8NC69 237 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 OR2T34Q8NGX1 318 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 PDLIM2Q96JY6 352 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 HSPA12BQ96MM6 686 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 HERPUD2Q9BSE4 406 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 SMOC1Q9H4F8 434 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 PLSCR2Q9NRY7 297 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 NCDNQ9UBB6 729 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 TRIM10Q9UDY6 481 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 GMEB2Q9UKD1 530 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 RAB23Q9ULC3 237 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 HPCAL4Q9UM19 191 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 PCDHA3Q9Y5H8 950 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 FADS3Q9Y5Q0 445 aa9.28□□□□□ -0.92
AC133561.2-202ENST00000561642 THADAQ6YHU6 1953 aa9.27□□□□□ -0.92
AC133561.2-202ENST00000561642 PCDH15Q96QU1 1955 aa9.27□□□□□ -0.92
AC133561.2-202ENST00000561642 A0A1W2PPC4 97 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 LNP1A1A4G5 178 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 MATN3O15232 486 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 DAPK3O43293 454 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 HTRA2O43464 458 aaPredicted RBP9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 PSTPIP1O43586 416 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 MFSD11O43934 449 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 GDF9O60383 454 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 FOXD2O60548 495 aaPredicted RBP9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 RNASEH2AO75792 299 aaKnown RBP9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 SERPINF2P08697 491 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 CCNCP24863 283 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 CTNNA2P26232 953 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 CD27P26842 260 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 CTNNA1P35221 906 aaKnown RBP9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 GARSP41250 739 aaKnown RBP9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 DPP6P42658 865 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 DHPSP49366 369 aaPredicted RBP9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 SNRPD1P62314 119 aaKnown RBP9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 CREB5Q02930 508 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 SFSWAPQ12872 951 aaKnown RBP9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 HNRNPDQ14103 355 aaKnown RBP9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 FGL2Q14314 439 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 CCDC6Q16204 474 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 ZNF284Q2VY69 593 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 TTC31Q49AM3 519 aaPredicted RBP9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 ZNF805Q5CZA5 627 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 DCAF12L1Q5VU92 463 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 TCEAL6Q6IPX3 200 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 ERN2Q76MJ5 926 aaKnown RBP9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 PARS2Q7L3T8 475 aaKnown RBP9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 FAM124AQ86V42 546 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 TRIM69Q86WT6 500 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 CACUL1Q86Y37 369 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 MAP7D3Q8IWC1 876 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 CNTD1Q8N815 330 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 EXD1Q8NHP7 514 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 ASB12Q8WXK4 309 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 ALG3Q92685 438 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 TCEAL3Q969E4 200 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 TADA1Q96BN2 335 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 IL12RB2Q99665 862 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 MGME1Q9BQP7 344 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 DESI2Q9BSY9 194 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 C1QTNF2Q9BXJ5 285 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 TM6SF2Q9BZW4 377 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 KLHL11Q9NVR0 708 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 DDX56Q9NY93 547 aaKnown RBP9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 UBA2Q9UBT2 640 aaPredicted RBP9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 ZFR2Q9UPR6 939 aaKnown RBP9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 NCKAP1Q9Y2A7 1128 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 EFR3BQ9Y2G0 817 aa9.27□□□□□ -0.93
AC133561.2-202ENST00000561642 PPIL1Q9Y3C6 166 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms