RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 YPEL5P62699 121 aa18.89■□□□□ 0.61
TPM1-226ENST00000560959 NME3Q13232 169 aa18.89■□□□□ 0.61
TPM1-226ENST00000560959 STIM1Q13586 685 aa18.89■□□□□ 0.61
TPM1-226ENST00000560959 RETSATQ6NUM9 610 aa18.89■□□□□ 0.61
TPM1-226ENST00000560959 ESRP1Q6NXG1 681 aaKnown RBP18.89■□□□□ 0.61
TPM1-226ENST00000560959 USP53Q70EK8 1073 aa18.89■□□□□ 0.61
TPM1-226ENST00000560959 WDTC1Q8N5D0 677 aa18.89■□□□□ 0.61
TPM1-226ENST00000560959 PPP1R13BQ96KQ4 1090 aa18.89■□□□□ 0.61
TPM1-226ENST00000560959 FAM81BQ96LP2 452 aa18.89■□□□□ 0.61
TPM1-226ENST00000560959 TNKS2Q9H2K2 1166 aa18.89■□□□□ 0.61
TPM1-226ENST00000560959 WDCPQ9H6R7 721 aa18.89■□□□□ 0.61
TPM1-226ENST00000560959 APOBEC3BQ9UH17 382 aaKnown RBP18.89■□□□□ 0.61
TPM1-226ENST00000560959 TRPM6Q9BX84 2022 aa18.89■□□□□ 0.61
TPM1-226ENST00000560959 IGLV3-10A0A075B6K4 115 aa18.88■□□□□ 0.61
TPM1-226ENST00000560959 ILVBLA1L0T0 632 aa18.88■□□□□ 0.61
TPM1-226ENST00000560959 IGLON5A6NGN9 336 aa18.88■□□□□ 0.61
TPM1-226ENST00000560959 NOBOXO60393 691 aa18.88■□□□□ 0.61
TPM1-226ENST00000560959 ANXA6P08133 673 aa18.88■□□□□ 0.61
TPM1-226ENST00000560959 ITGB6P18564 788 aa18.88■□□□□ 0.61
TPM1-226ENST00000560959 SLC5A2P31639 672 aa18.88■□□□□ 0.61
TPM1-226ENST00000560959 ADKP55263 362 aaKnown RBP18.88■□□□□ 0.61
TPM1-226ENST00000560959 CARD16Q5EG05 197 aa18.88■□□□□ 0.61
TPM1-226ENST00000560959 PRRT3Q5FWE3 981 aa18.88■□□□□ 0.61
TPM1-226ENST00000560959 TPRG1LQ5T0D9 272 aa18.88■□□□□ 0.61
TPM1-226ENST00000560959 LVRNQ6Q4G3 990 aa18.88■□□□□ 0.61
TPM1-226ENST00000560959 CRTC1Q6UUV9 634 aa18.88■□□□□ 0.61
TPM1-226ENST00000560959 LRRC31Q6UY01 552 aa18.88■□□□□ 0.61
TPM1-226ENST00000560959 LINGO4Q6UY18 593 aa18.88■□□□□ 0.61
TPM1-226ENST00000560959 C11orf57Q6ZUT1 292 aaPredicted RBP18.88■□□□□ 0.61
TPM1-226ENST00000560959 SLC26A9Q7LBE3 791 aa18.88■□□□□ 0.61
TPM1-226ENST00000560959 FBXO39Q8N4B4 442 aa18.88■□□□□ 0.61
TPM1-226ENST00000560959 ZNF397Q8NF99 534 aaPredicted RBP18.88■□□□□ 0.61
TPM1-226ENST00000560959 CENPTQ96BT3 561 aa18.88■□□□□ 0.61
TPM1-226ENST00000560959 CPXM1Q96SM3 734 aa18.88■□□□□ 0.61
TPM1-226ENST00000560959 ARHGAP9Q9BRR9 750 aa18.88■□□□□ 0.61
TPM1-226ENST00000560959 UBE2TQ9NPD8 197 aaPredicted RBP18.88■□□□□ 0.61
TPM1-226ENST00000560959 PAXBP1Q9Y5B6 917 aa18.88■□□□□ 0.61
TPM1-226ENST00000560959 M0QYT0 321 aa18.87■□□□□ 0.61
TPM1-226ENST00000560959 NVLO15381 856 aaKnown RBP18.87■□□□□ 0.61
TPM1-226ENST00000560959 YY2O15391 372 aa18.87■□□□□ 0.61
TPM1-226ENST00000560959 DAB1O75553 588 aa18.87■□□□□ 0.61
TPM1-226ENST00000560959 ZMPSTE24O75844 475 aa18.87■□□□□ 0.61
TPM1-226ENST00000560959 KRT10P13645 584 aa18.87■□□□□ 0.61
TPM1-226ENST00000560959 GGCXP38435 758 aa18.87■□□□□ 0.61
TPM1-226ENST00000560959 CXCR3P49682 368 aa18.87■□□□□ 0.61
TPM1-226ENST00000560959 SERPINH1P50454 418 aaKnown RBP18.87■□□□□ 0.61
TPM1-226ENST00000560959 OLFML1Q6UWY5 402 aa18.87■□□□□ 0.61
TPM1-226ENST00000560959 ZNF574Q6ZN55 896 aaPredicted RBP18.87■□□□□ 0.61
TPM1-226ENST00000560959 RAB11FIP2Q7L804 512 aa18.87■□□□□ 0.61
TPM1-226ENST00000560959 PHACTR4Q8IZ21 702 aa18.87■□□□□ 0.61
TPM1-226ENST00000560959 SDR16C5Q8N3Y7 309 aa18.87■□□□□ 0.61
TPM1-226ENST00000560959 ISG20Q96AZ6 181 aaKnown RBP18.87■□□□□ 0.61
TPM1-226ENST00000560959 PGAP3Q96FM1 320 aaPredicted RBP18.87■□□□□ 0.61
TPM1-226ENST00000560959 SLC13A1Q9BZW2 595 aa18.87■□□□□ 0.61
TPM1-226ENST00000560959 STRADBQ9C0K7 418 aa18.87■□□□□ 0.61
TPM1-226ENST00000560959 TKTL2Q9H0I9 626 aa18.87■□□□□ 0.61
TPM1-226ENST00000560959 PCDHGC3Q9UN70 934 aa18.87■□□□□ 0.61
TPM1-226ENST00000560959 ATP6V1DQ9Y5K8 247 aa18.87■□□□□ 0.61
TPM1-226ENST00000560959 GRAP2O75791 330 aa18.86■□□□□ 0.61
TPM1-226ENST00000560959 ADCY5O95622 1261 aa18.86■□□□□ 0.61
TPM1-226ENST00000560959 GNA14O95837 355 aa18.86■□□□□ 0.61
TPM1-226ENST00000560959 F9P00740 461 aa18.86■□□□□ 0.61
TPM1-226ENST00000560959 OR1E1P30953 314 aa18.86■□□□□ 0.61
TPM1-226ENST00000560959 UGT1A5P35504 534 aa18.86■□□□□ 0.61
TPM1-226ENST00000560959 CCNHP51946 323 aaPredicted RBP18.86■□□□□ 0.61
TPM1-226ENST00000560959 THOP1P52888 689 aa18.86■□□□□ 0.61
TPM1-226ENST00000560959 SLC6A3Q01959 620 aa18.86■□□□□ 0.61
TPM1-226ENST00000560959 DRAP1Q14919 205 aaPredicted RBP18.86■□□□□ 0.61
TPM1-226ENST00000560959 COLEC12Q5KU26 742 aa18.86■□□□□ 0.61
TPM1-226ENST00000560959 PARS2Q7L3T8 475 aaKnown RBP18.86■□□□□ 0.61
TPM1-226ENST00000560959 TRIM59Q8IWR1 403 aa18.86■□□□□ 0.61
TPM1-226ENST00000560959 FMR1NBQ8N0W7 255 aaPredicted RBP18.86■□□□□ 0.61
TPM1-226ENST00000560959 SMARCE1Q969G3 411 aa18.86■□□□□ 0.61
TPM1-226ENST00000560959 NT5C3BQ969T7 300 aa18.86■□□□□ 0.61
TPM1-226ENST00000560959 ARHGEF26Q96DR7 871 aa18.86■□□□□ 0.61
TPM1-226ENST00000560959 NPY6RQ99463 290 aa18.86■□□□□ 0.61
TPM1-226ENST00000560959 LRRC61Q9BV99 259 aa18.86■□□□□ 0.61
TPM1-226ENST00000560959 INTS2Q9H0H0 1204 aaKnown RBP18.86■□□□□ 0.61
TPM1-226ENST00000560959 PIGVQ9NUD9 493 aa18.86■□□□□ 0.61
TPM1-226ENST00000560959 ZDHHC9Q9Y397 364 aa18.86■□□□□ 0.61
TPM1-226ENST00000560959 RP1P56715 2156 aa18.85■□□□□ 0.61
TPM1-226ENST00000560959 ENDOD1O94919 500 aa18.85■□□□□ 0.61
TPM1-226ENST00000560959 AFPP02771 609 aaKnown RBP18.85■□□□□ 0.61
TPM1-226ENST00000560959 LIPCP11150 499 aa18.85■□□□□ 0.61
TPM1-226ENST00000560959 CCKBRP32239 447 aa18.85■□□□□ 0.61
TPM1-226ENST00000560959 BLKP51451 505 aa18.85■□□□□ 0.61
TPM1-226ENST00000560959 MARSP56192 900 aaKnown RBP18.85■□□□□ 0.61
TPM1-226ENST00000560959 TTI2Q6NXR4 508 aa18.85■□□□□ 0.61
TPM1-226ENST00000560959 FAM183BPQ6ZVS7 135 aa18.85■□□□□ 0.61
TPM1-226ENST00000560959 ZDHHC17Q8IUH5 632 aa18.85■□□□□ 0.61
TPM1-226ENST00000560959 RBFAQ8N0V3 343 aa18.85■□□□□ 0.61
TPM1-226ENST00000560959 FSTL5Q8N475 847 aaPredicted RBP18.85■□□□□ 0.61
TPM1-226ENST00000560959 ARL10Q8N8L6 244 aa18.85■□□□□ 0.61
TPM1-226ENST00000560959 OR6C4Q8NGE1 309 aa18.85■□□□□ 0.61
TPM1-226ENST00000560959 SCG3Q8WXD2 468 aaKnown RBP18.85■□□□□ 0.61
TPM1-226ENST00000560959 EXTL1Q92935 676 aa18.85■□□□□ 0.61
TPM1-226ENST00000560959 TMEM159Q96B96 161 aa18.85■□□□□ 0.61
TPM1-226ENST00000560959 TMEM74Q96NL1 305 aa18.85■□□□□ 0.61
TPM1-226ENST00000560959 GFM1Q96RP9 751 aaKnown RBP18.85■□□□□ 0.61
TPM1-226ENST00000560959 CLPBQ9H078 707 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms