RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 TNNT1P13805 278 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 KDELR1P24390 212 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 HOXD12P35452 270 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 RGRP47804 291 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 HADHBP55084 474 aaKnown RBP12.28□□□□□ -0.44
USP8-212ENST00000560730 RHOAP61586 193 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 SNRPD1P62314 119 aaKnown RBP12.28□□□□□ -0.44
USP8-212ENST00000560730 PPP2CBP62714 309 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 PPP2CAP67775 309 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 PDK2Q15119 407 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 ANKRD20A8PQ5CZ79 823 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 SLC23A3Q6PIS1 610 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 ZCCHC9Q8N567 271 aaKnown RBP12.28□□□□□ -0.44
USP8-212ENST00000560730 PQLC3Q8N755 202 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 CASKIN2Q8WXE0 1202 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 EXOC2Q96KP1 924 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 CAPN10Q9HC96 672 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 RCOR3Q9P2K3 495 aaPredicted RBP12.28□□□□□ -0.44
USP8-212ENST00000560730 TBC1D3DA0A087WVF3 549 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 TBC1D3IA0A087WXS9 549 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 TBC1D3EA0A087X179 549 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 TBC1D3KA0A087X1G2 549 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 A0A0A6YYK5 440 aaPredicted RBP12.27□□□□□ -0.45
USP8-212ENST00000560730 A0A0U1RQJ8 604 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 TBC1D3FA6NER0 549 aaPredicted RBP12.27□□□□□ -0.45
USP8-212ENST00000560730 LRRC72A6NJI9 287 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 PRR5-ARHGAP8B1AHC4 643 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 TBC1D3LB9A6J9 549 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 MFSD11O43934 449 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 MAP3K6O95382 1288 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 SERPINF2P08697 491 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 TBC1D3HP0C7X1 549 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 DPP6P42658 865 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 ARHGAP8P85298 464 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 IL10RBQ08334 325 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 ZFYVE27Q5T4F4 411 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 NCBP2-AS2Q69YL0 99 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 TBC1D3GQ6DHY5 549 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 TBC1D3CQ6IPX1 549 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 ERN2Q76MJ5 926 aaKnown RBP12.27□□□□□ -0.45
USP8-212ENST00000560730 TBC1D3Q8IZP1 549 aaPredicted RBP12.27□□□□□ -0.45
USP8-212ENST00000560730 TSEN2Q8NCE0 465 aaKnown RBP12.27□□□□□ -0.45
USP8-212ENST00000560730 OR2I1PQ8NGU4 316 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 CEP76Q8TAP6 659 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 FAF2Q96CS3 445 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 GDAP1L1Q96MZ0 367 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 EDEM2Q9BV94 578 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 LACRTQ9GZZ8 138 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 SLC6A14Q9UN76 642 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 ALG6Q9Y672 507 aa12.27□□□□□ -0.45
USP8-212ENST00000560730 SPTBN2O15020 2390 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 LRRK1Q38SD2 2015 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 A0A1B0GTW7 788 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 LRRD1A4D1F6 860 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 CDX4O14627 284 aaPredicted RBP12.26□□□□□ -0.45
USP8-212ENST00000560730 WNT9AO14904 365 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 MUSKO15146 869 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 BCAT2O15382 392 aaPredicted RBP12.26□□□□□ -0.45
USP8-212ENST00000560730 SLC7A4O43246 635 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 FOXD2O60548 495 aaPredicted RBP12.26□□□□□ -0.45
USP8-212ENST00000560730 MAFKO60675 156 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 GJB3O75712 270 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 PALMO75781 387 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 PEX11BO96011 259 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 UGT2B4P06133 528 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 ENGP17813 658 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 ITGB7P26010 798 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 CD27P26842 260 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 SLC1A1P43005 524 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 CSNK1EP49674 416 aaKnown RBP12.26□□□□□ -0.45
USP8-212ENST00000560730 CCR5P51681 352 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 BNC1Q01954 994 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 SLC10A7Q0GE19 358 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 SLC10A2Q12908 348 aaPredicted RBP12.26□□□□□ -0.45
USP8-212ENST00000560730 PAFAH1B3Q15102 231 aaKnown RBP12.26□□□□□ -0.45
USP8-212ENST00000560730 STPG1Q5TH74 334 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 LAYNQ6UX15 382 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 PARS2Q7L3T8 475 aaKnown RBP12.26□□□□□ -0.45
USP8-212ENST00000560730 MAP7D3Q8IWC1 876 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 TPCN2Q8NHX9 752 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 LRRN4Q8WUT4 740 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 NSMCE3Q96MG7 304 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 KLHL32Q96NJ5 620 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 RNF157Q96PX1 679 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 ZNF670Q9BS34 389 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 DESI2Q9BSY9 194 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 NUSAP1Q9BXS6 441 aaKnown RBP12.26□□□□□ -0.45
USP8-212ENST00000560730 HDAC8Q9BY41 377 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 SP110Q9HB58 689 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 TM9SF3Q9HD45 589 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 DYRK4Q9NR20 520 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 PCNX2A6NKB5 2137 aa12.26□□□□□ -0.45
USP8-212ENST00000560730 A0A1W2PPC4 97 aa12.25□□□□□ -0.45
USP8-212ENST00000560730 TTC24A2A3L6 582 aaPredicted RBP12.25□□□□□ -0.45
USP8-212ENST00000560730 C16orf96A6NNT2 1141 aa12.25□□□□□ -0.45
USP8-212ENST00000560730 C4orf47A7E2U8 309 aa12.25□□□□□ -0.45
USP8-212ENST00000560730 LATO43561 262 aa12.25□□□□□ -0.45
USP8-212ENST00000560730 SPOPO43791 374 aa12.25□□□□□ -0.45
USP8-212ENST00000560730 PIGNO95427 931 aa12.25□□□□□ -0.45
USP8-212ENST00000560730 IGSF6O95976 241 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms