RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 CTNND2Q9UQB3 1225 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 OR51B4Q9Y5P0 310 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 SNX10Q9Y5X0 201 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 HS3ST3A1Q9Y663 406 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 CSNK1G3Q9Y6M4 447 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 U3KQA8 63 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 DOCK4Q8N1I0 1966 aa10.7□□□□□ -0.7
CDC42BPB-207ENST00000560492 A0A0D9SEW6 157 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 FAM170AA1A519 330 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 BICDL2A1A5D9 508 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 IGLON5A6NGN9 336 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 RNF103O00237 685 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 SRGAP2O75044 1071 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 DAB1O75553 588 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 TCEA3O75764 348 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 GLI1P08151 1106 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 L1CAMP32004 1257 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 ADKP55263 362 aaKnown RBP10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 STX17P56962 302 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 SNX16P57768 344 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 DEUP1Q05D60 604 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 CLN3Q13286 438 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 PTK2BQ14289 1009 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 ALFQ53S48 1182 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 RETSATQ6NUM9 610 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 C1orf131Q8NDD1 294 aaKnown RBP10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 OR7D4Q8NG98 312 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 LMO3Q8TAP4 145 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 NELFBQ8WX92 580 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 DHTKD1Q96HY7 919 aaPredicted RBP10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 SLC2A13Q96QE2 648 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 CCDC3Q9BQI4 270 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 HEPHQ9BQS7 1158 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 TM6SF2Q9BZW4 377 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 PDCL3Q9H2J4 239 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 ATP13A1Q9HD20 1204 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 ASNSD1Q9NWL6 643 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 SIRPGQ9P1W8 387 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 SALL4Q9UJQ4 1053 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 TBC1D30Q9Y2I9 924 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 PAXBP1Q9Y5B6 917 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 PCDHGA8Q9Y5G5 932 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 PCDHGA10Q9Y5H3 936 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 MAST4O15021 2626 aa10.69□□□□□ -0.7
CDC42BPB-207ENST00000560492 A0A1W2PNU3 283 aaPredicted RBP10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 EME2A4GXA9 379 aaPredicted RBP10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 PMM2O15305 246 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 GJB6O95452 261 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 JMJD7P0C870 316 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 CTSEP14091 401 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 ITGB7P26010 798 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 NOS2P35228 1153 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 KRT9P35527 623 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 PPP1R2P41236 205 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 CSRP3P50461 194 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 CCNHP51946 323 aaPredicted RBP10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 NFKB2Q00653 900 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 FGL2Q14314 439 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 MEA1Q16626 185 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 GJB7Q6PEY0 223 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 IGF2-ASQ6U949 168 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 PARS2Q7L3T8 475 aaKnown RBP10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 SETD3Q86TU7 594 aaPredicted RBP10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 VPS36Q86VN1 386 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 ZNF354CQ86Y25 554 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 SLC35F3Q8IY50 421 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 DRC7Q8IY82 874 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 PHACTR4Q8IZ21 702 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 FBXO39Q8N4B4 442 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 PCDH20Q8N6Y1 951 aaKnown RBP10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 OR6K2Q8NGY2 324 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 WDR48Q8TAF3 677 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 CRACR2AQ9BSW2 395 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 STRADBQ9C0K7 418 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 TCEAL2Q9H3H9 227 aaPredicted RBP10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 PIGVQ9NUD9 493 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 KLF15Q9UIH9 416 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 STAP1Q9ULZ2 295 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 PADI4Q9UM07 663 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 ITM2BQ9Y287 266 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 FCF1Q9Y324 198 aaKnown RBP10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 FADS3Q9Y5Q0 445 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 WASF2Q9Y6W5 498 aa10.68□□□□□ -0.7
CDC42BPB-207ENST00000560492 CDRT15L2A8MXV6 281 aa10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 KRIT1O00522 736 aa10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 TPP1O14773 563 aa10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 PLD2O14939 933 aa10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 GNA14O95837 355 aa10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 ERBB2P04626 1255 aa10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 ITGA2BP08514 1039 aa10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 SLC5A2P31639 672 aa10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 SERPINH1P50454 418 aaKnown RBP10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 SLC6A3Q01959 620 aa10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 PTK2Q05397 1052 aa10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 EIF2B5Q13144 721 aaKnown RBP10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 EIF4EBP2Q13542 120 aaPredicted RBP10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 CARD16Q5EG05 197 aa10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 LRRC73Q5JTD7 316 aa10.67□□□□□ -0.7
CDC42BPB-207ENST00000560492 BRMS1LQ5PSV4 323 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms