RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 GOLGA8QA0A0J9YX86 632 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 A0A1W2PQ45 241 aaPredicted RBP9.83□□□□□ -0.84
RTF1-206ENST00000560447 A0A1W2PQY0 241 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 CARNS1A5YM72 827 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 GOLGA8OA6NCC3 632 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 F5H423 210 aaPredicted RBP9.83□□□□□ -0.84
RTF1-206ENST00000560447 GOLGA8NF8WBI6 632 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 TBC1D4O60343 1298 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 PEX11AO75192 247 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 USP12O75317 370 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 PEX11BO96011 259 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 EPOP01588 193 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 HLA-DQB2P05538 268 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 ZDHHC11BP0C7U3 371 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 HAPLN1P10915 354 aaPredicted RBP9.83□□□□□ -0.84
RTF1-206ENST00000560447 NMBRP28336 390 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 ARCN1P48444 511 aaKnown RBP9.83□□□□□ -0.84
RTF1-206ENST00000560447 CD151P48509 253 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 CLCN5P51795 746 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 POU4F1Q01851 419 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 TUBB3Q13509 450 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 THOC5Q13769 683 aaKnown RBP9.83□□□□□ -0.84
RTF1-206ENST00000560447 MBTPS1Q14703 1052 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 TRMT5Q32P41 509 aaKnown RBP9.83□□□□□ -0.84
RTF1-206ENST00000560447 RABGAP1LQ5R372 815 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 PIK3R6Q5UE93 754 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 MARC1Q5VT66 337 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 LIPMQ5VYY2 423 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 CES4AQ5XG92 561 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 ZYG11AQ6WRX3 759 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 ANKS3Q6ZW76 656 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 LRRC8DQ7L1W4 858 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 OTOP3Q7RTS5 596 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 NET1Q7Z628 596 aaPredicted RBP9.83□□□□□ -0.84
RTF1-206ENST00000560447 CTU1Q7Z7A3 348 aaKnown RBP9.83□□□□□ -0.84
RTF1-206ENST00000560447 SETD3Q86TU7 594 aaPredicted RBP9.83□□□□□ -0.84
RTF1-206ENST00000560447 C10orf107Q8IVU9 208 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 C2CD4AQ8NCU7 369 aaPredicted RBP9.83□□□□□ -0.84
RTF1-206ENST00000560447 PDZD8Q8NEN9 1154 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 FBXO32Q969P5 355 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 AZIN2Q96A70 460 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 TSPAN17Q96FV3 270 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 RSRC1Q96IZ7 334 aaKnown RBP9.83□□□□□ -0.84
RTF1-206ENST00000560447 RILPQ96NA2 401 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 SORT1Q99523 831 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 MIPEPQ99797 713 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 FICDQ9BVA6 458 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 TTLL2Q9BWV7 592 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 C1QTNF1Q9BXJ1 281 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 IL21Q9HBE4 155 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 STARD7Q9NQZ5 370 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 FBXO6Q9NRD1 293 aaPredicted RBP9.83□□□□□ -0.84
RTF1-206ENST00000560447 TAS2R1Q9NYW7 299 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 STOML1Q9UBI4 398 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 DNAJB4Q9UDY4 337 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 SFMBT1Q9UHJ3 866 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 MAGED2Q9UNF1 606 aaPredicted RBP9.83□□□□□ -0.84
RTF1-206ENST00000560447 ACOT9Q9Y305 439 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 RAP2CQ9Y3L5 183 aa9.83□□□□□ -0.84
RTF1-206ENST00000560447 TTC3P53804 2025 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 UTRNP46939 3433 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 CCDC195A0A1B0GUA6 201 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 G3V2L1 256 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 HGSO14964 777 aaPredicted RBP9.82□□□□□ -0.84
RTF1-206ENST00000560447 SLC7A4O43246 635 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 NPHS1O60500 1241 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 TM7SF2O76062 418 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 ANP32DO95626 131 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 PENKP01210 267 aaPredicted RBP9.82□□□□□ -0.84
RTF1-206ENST00000560447 ALDH2P05091 517 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 ELNP15502 786 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 STMN1P16949 149 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 PBX3P40426 434 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 NUMBP49757 651 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 SERPINH1P50454 418 aaKnown RBP9.82□□□□□ -0.84
RTF1-206ENST00000560447 WNT3AP56704 352 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 DNAJB13P59910 316 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 RAB10P61026 200 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 PRKAA1Q13131 559 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 USP10Q14694 798 aaKnown RBP9.82□□□□□ -0.84
RTF1-206ENST00000560447 GRM3Q14832 879 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 ZRSR2Q15696 482 aaKnown RBP9.82□□□□□ -0.84
RTF1-206ENST00000560447 HSF5Q4G112 596 aaPredicted RBP9.82□□□□□ -0.84
RTF1-206ENST00000560447 MS4A13Q5J8X5 152 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 SH2D4BQ5SQS7 431 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 SNX30Q5VWJ9 437 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 ALG1LQ6GMV1 187 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 C16orf46Q6P387 395 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 KLHDC10Q6PID8 442 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 CES3Q6UWW8 571 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 CMC1Q7Z7K0 106 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.82□□□□□ -0.84
RTF1-206ENST00000560447 BBS5Q8N3I7 341 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 NETO2Q8NC67 525 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 IPMKQ8NFU5 416 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 RAET1EQ8TD07 263 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 STYXQ8WUJ0 223 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 SEPT8Q92599 483 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 CMTM5Q96DZ9 223 aa9.82□□□□□ -0.84
RTF1-206ENST00000560447 MRGPRX2Q96LB1 330 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms