RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 PRKAG3Q9UGI9 489 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 SH3BP1Q9Y3L3 701 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 TCAF1Q9Y4C2 921 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 OR51B4Q9Y5P0 310 aa12.86□□□□□ -0.35
USP3-213ENST00000559711 H0Y626 953 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 LEFTY2O00292 366 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 NDUFAB1O14561 156 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 TM9SF1O15321 606 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 ZMPSTE24O75844 475 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 CA3P07451 260 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 PYGBP11216 843 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 EPCAMP16422 314 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 CES1P23141 567 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 GLDCP23378 1020 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 NMBRP28336 390 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 CHRNA4P43681 627 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 SLC1A5Q15758 541 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 PCSK7Q16549 785 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 FSCBQ5H9T9 825 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 TEDDM1Q5T9Z0 273 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 RASSF3Q86WH2 238 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 BBS7Q8IWZ6 715 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 CMTM8Q8IZV2 173 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 CARNMT1Q8N4J0 409 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 PPHLN1Q8NEY8 458 aaKnown RBP12.85□□□□□ -0.35
USP3-213ENST00000559711 DYDC1Q8WWB3 177 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 TCEAL4Q96EI5 215 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 ALG14Q96F25 216 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 ZNF778Q96MU6 729 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 RANBP9Q96S59 729 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 CPNE1Q99829 537 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 FEM1AQ9BSK4 669 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 MUC3BQ9H195 1237 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 RABEP2Q9H5N1 569 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 TASP1Q9H6P5 420 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 PSAT1Q9Y617 370 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 ANAPC1Q9H1A4 1944 aa12.85□□□□□ -0.35
USP3-213ENST00000559711 E2F8A0AVK6 867 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 TTC24A2A3L6 582 aaPredicted RBP12.84□□□□□ -0.35
USP3-213ENST00000559711 SCAMP3O14828 347 aaKnown RBP12.84□□□□□ -0.35
USP3-213ENST00000559711 XYLBO75191 536 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 CD160O95971 181 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 RHOP08100 348 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 CR2P20023 1033 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 DRD4P21917 467 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 GP5P40197 560 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 CCNFP41002 786 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 SERPINH1P50454 418 aaKnown RBP12.84□□□□□ -0.35
USP3-213ENST00000559711 NEK3P51956 506 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 IL9RQ01113 521 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 BMPR2Q13873 1038 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 POU6F1Q14863 301 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 CYTH1Q15438 398 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 MPPE1Q53F39 396 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 INO80DQ53TQ3 878 aaPredicted RBP12.84□□□□□ -0.35
USP3-213ENST00000559711 GPR158Q5T848 1215 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 GRTP1Q5TC63 336 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 PDPK2PQ6A1A2 396 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 KDELC2Q7Z4H8 507 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 KCNMB4Q86W47 210 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 TDRD5Q8NAT2 981 aaKnown RBP12.84□□□□□ -0.35
USP3-213ENST00000559711 ZNF473Q8WTR7 871 aaKnown RBP12.84□□□□□ -0.35
USP3-213ENST00000559711 APOPT1Q96IL0 206 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 FEM1CQ96JP0 617 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 MAGEB18Q96M61 343 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 KLF6Q99612 283 aaPredicted RBP12.84□□□□□ -0.35
USP3-213ENST00000559711 PRKD2Q9BZL6 878 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 MLXIPLQ9NP71 852 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 TREX1Q9NSU2 369 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 C20orf96Q9NUD7 363 aaPredicted RBP12.84□□□□□ -0.35
USP3-213ENST00000559711 MKS1Q9NXB0 559 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 ZDHHC7Q9NXF8 308 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 IL1RAPL1Q9NZN1 696 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 SLC17A6Q9P2U8 582 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 DPP7Q9UHL4 492 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 ACTL7AQ9Y615 435 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 CHD9Q3L8U1 2897 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 SHROOM3Q8TF72 1996 aa12.84□□□□□ -0.35
USP3-213ENST00000559711 HEATR9A2RTY3 570 aa12.83□□□□□ -0.35
USP3-213ENST00000559711 ERICH4A6NGS2 130 aa12.83□□□□□ -0.35
USP3-213ENST00000559711 GOLGA8RI6L899 631 aa12.83□□□□□ -0.35
USP3-213ENST00000559711 CBX4O00257 560 aa12.83□□□□□ -0.35
USP3-213ENST00000559711 SERPINF2P08697 491 aa12.83□□□□□ -0.35
USP3-213ENST00000559711 ATXN1LP0C7T5 689 aaKnown RBP12.83□□□□□ -0.35
USP3-213ENST00000559711 MZF1P28698 734 aaPredicted RBP12.83□□□□□ -0.35
USP3-213ENST00000559711 ARCN1P48444 511 aaKnown RBP12.83□□□□□ -0.35
USP3-213ENST00000559711 ARF5P84085 180 aa12.83□□□□□ -0.35
USP3-213ENST00000559711 CDK18Q07002 472 aa12.83□□□□□ -0.35
USP3-213ENST00000559711 GPM6BQ13491 265 aa12.83□□□□□ -0.35
USP3-213ENST00000559711 SHHQ15465 462 aa12.83□□□□□ -0.35
USP3-213ENST00000559711 TEAD2Q15562 447 aa12.83□□□□□ -0.35
USP3-213ENST00000559711 ARHGAP15Q53QZ3 475 aa12.83□□□□□ -0.35
USP3-213ENST00000559711 HSP90AA5PQ58FG0 334 aa12.83□□□□□ -0.35
USP3-213ENST00000559711 PRSS36Q5K4E3 855 aa12.83□□□□□ -0.35
USP3-213ENST00000559711 MROH9Q5TGP6 573 aa12.83□□□□□ -0.35
USP3-213ENST00000559711 FYB2Q5VWT5 728 aa12.83□□□□□ -0.35
USP3-213ENST00000559711 SLC25A41Q8N5S1 370 aa12.83□□□□□ -0.35
USP3-213ENST00000559711 GDAP1Q8TB36 358 aa12.83□□□□□ -0.35
USP3-213ENST00000559711 TCP10LQ8TDR4 215 aa12.83□□□□□ -0.35
USP3-213ENST00000559711 ACMSDQ8TDX5 336 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms