RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 WASF2Q9Y6W5 498 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 NCOR2Q9Y618 2525 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 DOCK9Q9BZ29 2069 aa8.33□□□□□ -1.08
SNX1-207ENST00000559401 CXorf51AA0A1B0GTR3 108 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 TMEM110-MUSTN1A8MSY1 372 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 WASH4PA8MWX3 477 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 H0Y8X5 98 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 MYO1FO00160 1098 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 RNF103O00237 685 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 WNT9AO14904 365 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 LATO43561 262 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 MFAP3LO75121 409 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 ZNF821O75541 412 aaPredicted RBP8.32□□□□□ -1.08
SNX1-207ENST00000559401 GJB3O75712 270 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 POP4O95707 220 aaKnown RBP8.32□□□□□ -1.08
SNX1-207ENST00000559401 CD160O95971 181 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 WNT1P04628 370 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 CYP1A2P05177 515 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 ADRB3P13945 408 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 TCF4P15884 667 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 XPAP23025 273 aaPredicted RBP8.32□□□□□ -1.08
SNX1-207ENST00000559401 ITGB7P26010 798 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 PCK1P35558 622 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 NUDT1P36639 197 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 PAPOLAP51003 745 aaKnown RBP8.32□□□□□ -1.08
SNX1-207ENST00000559401 NDST2P52849 883 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 ADKP55263 362 aaKnown RBP8.32□□□□□ -1.08
SNX1-207ENST00000559401 TAS2R38P59533 333 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 SUZ12Q15022 739 aaKnown RBP8.32□□□□□ -1.08
SNX1-207ENST00000559401 SLC18A3Q16572 532 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 HADHQ16836 314 aaKnown RBP8.32□□□□□ -1.08
SNX1-207ENST00000559401 MYLK3Q32MK0 819 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 PRAMEF14Q5SWL7 426 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 ZFYVE27Q5T4F4 411 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 CFAP58Q5T655 872 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 PIP4P1Q86T03 277 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 PSTKQ8IV42 348 aaKnown RBP8.32□□□□□ -1.08
SNX1-207ENST00000559401 ZNF564Q8TBZ8 553 aaPredicted RBP8.32□□□□□ -1.08
SNX1-207ENST00000559401 RHBDD1Q8TEB9 315 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 CASKIN2Q8WXE0 1202 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 CCDC42Q96M95 316 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 KLHL32Q96NJ5 620 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 ORAI3Q9BRQ5 295 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 CINPQ9BW66 212 aaPredicted RBP8.32□□□□□ -1.08
SNX1-207ENST00000559401 HDAC8Q9BY41 377 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 SLC39A8Q9C0K1 460 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 FZD3Q9NPG1 666 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 GDF3Q9NR23 364 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 ABHD10Q9NUJ1 306 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 CWC15Q9P013 229 aaKnown RBP8.32□□□□□ -1.08
SNX1-207ENST00000559401 ANGPTL2Q9UKU9 493 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 CA5BQ9Y2D0 317 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 ANKRD36A6QL64 1941 aa8.32□□□□□ -1.08
SNX1-207ENST00000559401 SHROOM3Q8TF72 1996 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 A0A1W2PR77 199 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 GOLGA8CPA6NN73 597 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 C16orf96A6NNT2 1141 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 UPK3BL1B0FP48 263 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 UPK3BL2E5RIL1 263 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 PRAMEF26H0Y7S4 382 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 J3KR12 359 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 TLR4O00206 839 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 FLRT2O43155 660 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 MAGEC1O60732 1142 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 PALMO75781 387 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 H2AFZP0C0S5 128 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 ZNF883P0CG24 379 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 RARAP10276 462 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 AMPD1P23109 780 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 IL1R2P27930 398 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 AKT2P31751 481 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 HNRNPH3P31942 346 aaKnown RBP8.31□□□□□ -1.08
SNX1-207ENST00000559401 ABL2P42684 1182 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 CTSKP43235 329 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 ARRB1P49407 418 aaPredicted RBP8.31□□□□□ -1.08
SNX1-207ENST00000559401 ZNF135P52742 658 aaPredicted RBP8.31□□□□□ -1.08
SNX1-207ENST00000559401 CDH6P55285 790 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 HNRNPDQ14103 355 aaKnown RBP8.31□□□□□ -1.08
SNX1-207ENST00000559401 TRIP6Q15654 476 aaKnown RBP8.31□□□□□ -1.08
SNX1-207ENST00000559401 INAVAQ3KP66 663 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 BOLA3Q53S33 107 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 INO80DQ53TQ3 878 aaPredicted RBP8.31□□□□□ -1.08
SNX1-207ENST00000559401 CCDC157Q569K6 752 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 ZNF805Q5CZA5 627 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 LRRC73Q5JTD7 316 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 SEL1L3Q68CR1 1132 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 KIAA1161Q6NSJ0 714 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 NEK5Q6P3R8 708 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 TMCO3Q6UWJ1 677 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 GDPD4Q6W3E5 623 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 CYP4V2Q6ZWL3 525 aaPredicted RBP8.31□□□□□ -1.08
SNX1-207ENST00000559401 H2AFVQ71UI9 128 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 HORMAD1Q86X24 394 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 CNGA4Q8IV77 575 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 NPWQ8N729 165 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 MFSD2AQ8NA29 543 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 FAM131CQ96AQ9 280 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 LRIG1Q96JA1 1093 aa8.31□□□□□ -1.08
SNX1-207ENST00000559401 ELF4Q99607 663 aaPredicted RBP8.31□□□□□ -1.08
SNX1-207ENST00000559401 DNAJC7Q99615 494 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms