RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 NRSN2Q9GZP1 204 aa15.19■□□□□ 0.02
LRRC28-213ENST00000559399 GPR27Q9NS67 375 aa15.19■□□□□ 0.02
LRRC28-213ENST00000559399 DNAJC28Q9NX36 388 aa15.19■□□□□ 0.02
LRRC28-213ENST00000559399 CLCA2Q9UQC9 943 aa15.19■□□□□ 0.02
LRRC28-213ENST00000559399 HS3ST3A1Q9Y663 406 aa15.19■□□□□ 0.02
LRRC28-213ENST00000559399 AK5Q9Y6K8 562 aa15.19■□□□□ 0.02
LRRC28-213ENST00000559399 DSPP15924 2871 aaKnown RBP15.19■□□□□ 0.02
LRRC28-213ENST00000559399 CACNA1GO43497 2377 aa15.19■□□□□ 0.02
LRRC28-213ENST00000559399 ANKRD11Q6UB99 2663 aaPredicted RBP15.18■□□□□ 0.02
LRRC28-213ENST00000559399 ZSCAN5CA6NGD5 496 aaPredicted RBP15.18■□□□□ 0.02
LRRC28-213ENST00000559399 KRIT1O00522 736 aa15.18■□□□□ 0.02
LRRC28-213ENST00000559399 NEMP1O14524 444 aa15.18■□□□□ 0.02
LRRC28-213ENST00000559399 RAD51BO15315 384 aa15.18■□□□□ 0.02
LRRC28-213ENST00000559399 TSPAN6O43657 245 aa15.18■□□□□ 0.02
LRRC28-213ENST00000559399 PAK4O96013 591 aaPredicted RBP15.18■□□□□ 0.02
LRRC28-213ENST00000559399 GKP32189 559 aa15.18■□□□□ 0.02
LRRC28-213ENST00000559399 ABL2P42684 1182 aa15.18■□□□□ 0.02
LRRC28-213ENST00000559399 RABIFP47224 123 aa15.18■□□□□ 0.02
LRRC28-213ENST00000559399 E2F1Q01094 437 aa15.18■□□□□ 0.02
LRRC28-213ENST00000559399 MYL5Q02045 173 aa15.18■□□□□ 0.02
LRRC28-213ENST00000559399 SGCGQ13326 291 aa15.18■□□□□ 0.02
LRRC28-213ENST00000559399 COL9A2Q14055 689 aaPredicted RBP15.18■□□□□ 0.02
LRRC28-213ENST00000559399 RTP5Q14D33 572 aa15.18■□□□□ 0.02
LRRC28-213ENST00000559399 ZNF805Q5CZA5 627 aa15.18■□□□□ 0.02
LRRC28-213ENST00000559399 ZNF542PQ5EBM4 170 aa15.18■□□□□ 0.02
LRRC28-213ENST00000559399 SLFN11Q7Z7L1 901 aa15.18■□□□□ 0.02
LRRC28-213ENST00000559399 PARGQ86W56 976 aa15.18■□□□□ 0.02
LRRC28-213ENST00000559399 CACTIN-AS1Q8N1I8 211 aa15.18■□□□□ 0.02
LRRC28-213ENST00000559399 DCBLD1Q8N8Z6 715 aa15.18■□□□□ 0.02
LRRC28-213ENST00000559399 BMFQ96LC9 184 aa15.18■□□□□ 0.02
LRRC28-213ENST00000559399 MAGEB5Q9BZ81 275 aa15.18■□□□□ 0.02
LRRC28-213ENST00000559399 SEPT11Q9NVA2 429 aaKnown RBP15.18■□□□□ 0.02
LRRC28-213ENST00000559399 ANO10Q9NW15 660 aa15.18■□□□□ 0.02
LRRC28-213ENST00000559399 NLGN3Q9NZ94 848 aa15.18■□□□□ 0.02
LRRC28-213ENST00000559399 LIMA1Q9UHB6 759 aaKnown RBP15.18■□□□□ 0.02
LRRC28-213ENST00000559399 KNL1Q8NG31 2342 aa15.18■□□□□ 0.02
LRRC28-213ENST00000559399 TMEM131Q92545 1883 aa15.18■□□□□ 0.02
LRRC28-213ENST00000559399 CELSR3Q9NYQ7 3312 aa15.18■□□□□ 0.02
LRRC28-213ENST00000559399 NYNRINQ9P2P1 1898 aaKnown RBP15.17■□□□□ 0.02
LRRC28-213ENST00000559399 ANKRD62A6NC57 917 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 POM121BA6NF01 834 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 NEMP2A6NFY4 417 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 IGLON5A6NGN9 336 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 SIGLEC16A6NMB1 481 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 C16orf96A6NNT2 1141 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 H3BM21 787 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 FPGTO14772 594 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 BUB1O43683 1085 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 KDELR3O43731 214 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 UGT2B4P06133 528 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 GIMD1P0DJR0 217 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 CKMT1AP12532 417 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 NME1P15531 152 aaKnown RBP15.17■□□□□ 0.02
LRRC28-213ENST00000559399 EPHB2P29323 1055 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 ANP32AP39687 249 aaKnown RBP15.17■□□□□ 0.02
LRRC28-213ENST00000559399 ABCG1P45844 678 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 HNRNPKP61978 463 aaKnown RBP eCLIP15.17■□□□□ 0.02
LRRC28-213ENST00000559399 SEMG2Q02383 582 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 UBXN1Q04323 297 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 FZD2Q14332 565 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 MYLK3Q32MK0 819 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 EFHC2Q5JST6 749 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 DNAJC24Q6P3W2 148 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 WDR59Q6PJI9 974 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 SASS6Q6UVJ0 657 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 LEKR1Q6ZMV7 388 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 MON1BQ7L1V2 547 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 ZNF354CQ86Y25 554 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 RTL3Q8N8U3 475 aaKnown RBP15.17■□□□□ 0.02
LRRC28-213ENST00000559399 DENND6BQ8NEG7 585 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 ARHGEF26Q96DR7 871 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 GDAP1L1Q96MZ0 367 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 GBP4Q96PP9 640 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 LENG8Q96PV6 779 aaPredicted RBP15.17■□□□□ 0.02
LRRC28-213ENST00000559399 DUSP23Q9BVJ7 150 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 C1QTNF2Q9BXJ5 285 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 EVA1BQ9NVM1 165 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 ITM2BQ9Y287 266 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 CABIN1Q9Y6J0 2220 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 ITPR1Q14643 2758 aa15.17■□□□□ 0.02
LRRC28-213ENST00000559399 LAMA5O15230 3695 aa15.16■□□□□ 0.02
LRRC28-213ENST00000559399 PLXNB3Q9ULL4 1909 aa15.16■□□□□ 0.02
LRRC28-213ENST00000559399 SPTY2D1-AS1A0A0U1RR47 76 aa15.16■□□□□ 0.02
LRRC28-213ENST00000559399 SCAMP1O15126 338 aa15.16■□□□□ 0.02
LRRC28-213ENST00000559399 CCP110O43303 1012 aa15.16■□□□□ 0.02
LRRC28-213ENST00000559399 TMCC1O94876 653 aa15.16■□□□□ 0.02
LRRC28-213ENST00000559399 POP4O95707 220 aaKnown RBP15.16■□□□□ 0.02
LRRC28-213ENST00000559399 CSF2P04141 144 aa15.16■□□□□ 0.02
LRRC28-213ENST00000559399 ZNF143P52747 638 aaPredicted RBP15.16■□□□□ 0.02
LRRC28-213ENST00000559399 C1QBPQ07021 282 aaKnown RBP15.16■□□□□ 0.02
LRRC28-213ENST00000559399 PDE1CQ14123 709 aaPredicted RBP15.16■□□□□ 0.02
LRRC28-213ENST00000559399 STX1AQ16623 288 aa15.16■□□□□ 0.02
LRRC28-213ENST00000559399 ATXN7L2Q5T6C5 722 aaPredicted RBP15.16■□□□□ 0.02
LRRC28-213ENST00000559399 TMC6Q7Z403 805 aa15.16■□□□□ 0.02
LRRC28-213ENST00000559399 ZNF548Q8NEK5 533 aaPredicted RBP15.16■□□□□ 0.02
LRRC28-213ENST00000559399 CASKIN2Q8WXE0 1202 aa15.16■□□□□ 0.02
LRRC28-213ENST00000559399 ASB12Q8WXK4 309 aa15.16■□□□□ 0.02
LRRC28-213ENST00000559399 APOLD1Q96LR9 279 aa15.16■□□□□ 0.02
LRRC28-213ENST00000559399 KLHL32Q96NJ5 620 aa15.16■□□□□ 0.02
LRRC28-213ENST00000559399 KLF6Q99612 283 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms