RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 METTL12A8MUP2 240 aa18.99■□□□□ 0.63
CASC4-209ENST00000559222 MEI4A8MW99 385 aa18.99■□□□□ 0.63
CASC4-209ENST00000559222 KRIT1O00522 736 aa18.99■□□□□ 0.63
CASC4-209ENST00000559222 GDF9O60383 454 aa18.99■□□□□ 0.63
CASC4-209ENST00000559222 PIGNO95427 931 aa18.99■□□□□ 0.63
CASC4-209ENST00000559222 IGHV4-34P06331 123 aa18.99■□□□□ 0.63
CASC4-209ENST00000559222 MYLK3Q32MK0 819 aa18.99■□□□□ 0.63
CASC4-209ENST00000559222 LRRC73Q5JTD7 316 aa18.99■□□□□ 0.63
CASC4-209ENST00000559222 SPDYCQ5MJ68 293 aa18.99■□□□□ 0.63
CASC4-209ENST00000559222 PEAR1Q5VY43 1037 aaPredicted RBP18.99■□□□□ 0.63
CASC4-209ENST00000559222 PARS2Q7L3T8 475 aaKnown RBP18.99■□□□□ 0.63
CASC4-209ENST00000559222 LRRC8AQ8IWT6 810 aa18.99■□□□□ 0.63
CASC4-209ENST00000559222 PGBD5Q8N414 524 aa18.99■□□□□ 0.63
CASC4-209ENST00000559222 LRRC57Q8N9N7 239 aa18.99■□□□□ 0.63
CASC4-209ENST00000559222 TMIEQ8NEW7 156 aa18.99■□□□□ 0.63
CASC4-209ENST00000559222 OR14C36Q8NHC7 312 aa18.99■□□□□ 0.63
CASC4-209ENST00000559222 SNX19Q92543 992 aa18.99■□□□□ 0.63
CASC4-209ENST00000559222 BIRC7Q96CA5 298 aa18.99■□□□□ 0.63
CASC4-209ENST00000559222 GDAP1L1Q96MZ0 367 aa18.99■□□□□ 0.63
CASC4-209ENST00000559222 ORAI3Q9BRQ5 295 aa18.99■□□□□ 0.63
CASC4-209ENST00000559222 SGK2Q9HBY8 427 aa18.99■□□□□ 0.63
CASC4-209ENST00000559222 DONSONQ9NYP3 566 aa18.99■□□□□ 0.63
CASC4-209ENST00000559222 FZD4Q9ULV1 537 aa18.99■□□□□ 0.63
CASC4-209ENST00000559222 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.99■□□□□ 0.63
CASC4-209ENST00000559222 FARP1Q9Y4F1 1045 aaPredicted RBP18.99■□□□□ 0.63
CASC4-209ENST00000559222 PSTPIP1O43586 416 aa18.98■□□□□ 0.63
CASC4-209ENST00000559222 FSBPO95073 299 aa18.98■□□□□ 0.63
CASC4-209ENST00000559222 PRNPP04156 253 aa18.98■□□□□ 0.63
CASC4-209ENST00000559222 UGT2B4P06133 528 aa18.98■□□□□ 0.63
CASC4-209ENST00000559222 KRT10P13645 584 aa18.98■□□□□ 0.63
CASC4-209ENST00000559222 SERPINB6P35237 376 aa18.98■□□□□ 0.63
CASC4-209ENST00000559222 SNRPD1P62314 119 aaKnown RBP18.98■□□□□ 0.63
CASC4-209ENST00000559222 DYNLT1P63172 113 aa18.98■□□□□ 0.63
CASC4-209ENST00000559222 ADCY2Q08462 1091 aa18.98■□□□□ 0.63
CASC4-209ENST00000559222 GALNT2Q10471 571 aa18.98■□□□□ 0.63
CASC4-209ENST00000559222 CSRP2Q16527 193 aa18.98■□□□□ 0.63
CASC4-209ENST00000559222 FAM46CQ5VWP2 391 aa18.98■□□□□ 0.63
CASC4-209ENST00000559222 KIAA0895LQ68EN5 471 aa18.98■□□□□ 0.63
CASC4-209ENST00000559222 PRR23CQ6ZRP0 262 aa18.98■□□□□ 0.63
CASC4-209ENST00000559222 B4GALNT4Q76KP1 1039 aa18.98■□□□□ 0.63
CASC4-209ENST00000559222 PLPP6Q8IY26 295 aa18.98■□□□□ 0.63
CASC4-209ENST00000559222 RGL4Q8IZJ4 473 aa18.98■□□□□ 0.63
CASC4-209ENST00000559222 ATPAF2Q8N5M1 289 aa18.98■□□□□ 0.63
CASC4-209ENST00000559222 CADM4Q8NFZ8 388 aa18.98■□□□□ 0.63
CASC4-209ENST00000559222 CASKIN2Q8WXE0 1202 aa18.98■□□□□ 0.63
CASC4-209ENST00000559222 HERPUD2Q9BSE4 406 aa18.98■□□□□ 0.63
CASC4-209ENST00000559222 DTLQ9NZJ0 730 aa18.98■□□□□ 0.63
CASC4-209ENST00000559222 EIF2B4Q9UI10 523 aaKnown RBP18.98■□□□□ 0.63
CASC4-209ENST00000559222 CAPN6Q9Y6Q1 641 aa18.98■□□□□ 0.63
CASC4-209ENST00000559222 TMEM131Q92545 1883 aa18.98■□□□□ 0.63
CASC4-209ENST00000559222 LRRK1Q38SD2 2015 aa18.98■□□□□ 0.63
CASC4-209ENST00000559222 SPINT1O43278 529 aa18.97■□□□□ 0.63
CASC4-209ENST00000559222 PLRG1O43660 514 aaKnown RBP18.97■□□□□ 0.63
CASC4-209ENST00000559222 PALMO75781 387 aa18.97■□□□□ 0.63
CASC4-209ENST00000559222 IGSF6O95976 241 aa18.97■□□□□ 0.63
CASC4-209ENST00000559222 ZNF806P0C7X5 589 aa18.97■□□□□ 0.63
CASC4-209ENST00000559222 ABL2P42684 1182 aa18.97■□□□□ 0.63
CASC4-209ENST00000559222 CDKN2BP42772 138 aa18.97■□□□□ 0.63
CASC4-209ENST00000559222 NAP1L1P55209 391 aaKnown RBP18.97■□□□□ 0.63
CASC4-209ENST00000559222 LBRQ14739 615 aaKnown RBP18.97■□□□□ 0.63
CASC4-209ENST00000559222 TAZQ16635 292 aa18.97■□□□□ 0.63
CASC4-209ENST00000559222 SLC9A4Q6AI14 798 aa18.97■□□□□ 0.63
CASC4-209ENST00000559222 LAYNQ6UX15 382 aa18.97■□□□□ 0.63
CASC4-209ENST00000559222 SPOCD1Q6ZMY3 1216 aa18.97■□□□□ 0.63
CASC4-209ENST00000559222 RFX6Q8HWS3 928 aa18.97■□□□□ 0.63
CASC4-209ENST00000559222 SYT12Q8IV01 421 aa18.97■□□□□ 0.63
CASC4-209ENST00000559222 MAP7D3Q8IWC1 876 aa18.97■□□□□ 0.63
CASC4-209ENST00000559222 ZCCHC9Q8N567 271 aaKnown RBP18.97■□□□□ 0.63
CASC4-209ENST00000559222 KLHL32Q96NJ5 620 aa18.97■□□□□ 0.63
CASC4-209ENST00000559222 MIR1-1HGQ9H1L0 117 aa18.97■□□□□ 0.63
CASC4-209ENST00000559222 VPS45Q9NRW7 570 aa18.97■□□□□ 0.63
CASC4-209ENST00000559222 DDX56Q9NY93 547 aaKnown RBP18.97■□□□□ 0.63
CASC4-209ENST00000559222 GGT7Q9UJ14 662 aa18.97■□□□□ 0.63
CASC4-209ENST00000559222 PACSIN2Q9UNF0 486 aaPredicted RBP18.97■□□□□ 0.63
CASC4-209ENST00000559222 ITM2BQ9Y287 266 aa18.97■□□□□ 0.63
CASC4-209ENST00000559222 WNT9AO14904 365 aa18.96■□□□□ 0.63
CASC4-209ENST00000559222 LRP3O75074 770 aa18.96■□□□□ 0.63
CASC4-209ENST00000559222 ITIH2P19823 946 aa18.96■□□□□ 0.63
CASC4-209ENST00000559222 ITGB7P26010 798 aa18.96■□□□□ 0.63
CASC4-209ENST00000559222 GARSP41250 739 aaKnown RBP18.96■□□□□ 0.63
CASC4-209ENST00000559222 TMCO4Q5TGY1 634 aa18.96■□□□□ 0.63
CASC4-209ENST00000559222 AADACL2Q6P093 401 aa18.96■□□□□ 0.63
CASC4-209ENST00000559222 ERN2Q76MJ5 926 aaKnown RBP18.96■□□□□ 0.63
CASC4-209ENST00000559222 ZSWIM9Q86XI8 627 aa18.96■□□□□ 0.63
CASC4-209ENST00000559222 KATNAL2Q8IYT4 538 aa18.96■□□□□ 0.63
CASC4-209ENST00000559222 OR2T34Q8NGX1 318 aa18.96■□□□□ 0.63
CASC4-209ENST00000559222 C1orf216Q8TAB5 229 aa18.96■□□□□ 0.63
CASC4-209ENST00000559222 DNASE2BQ8WZ79 361 aa18.96■□□□□ 0.63
CASC4-209ENST00000559222 FOXJ1Q92949 421 aa18.96■□□□□ 0.63
CASC4-209ENST00000559222 CINPQ9BW66 212 aaPredicted RBP18.96■□□□□ 0.63
CASC4-209ENST00000559222 ZNF487B1APH4 448 aa18.95■□□□□ 0.62
CASC4-209ENST00000559222 APOL1O14791 398 aa18.95■□□□□ 0.62
CASC4-209ENST00000559222 ARHGAP6O43182 974 aa18.95■□□□□ 0.62
CASC4-209ENST00000559222 POP4O95707 220 aaKnown RBP18.95■□□□□ 0.62
CASC4-209ENST00000559222 FTCDO95954 541 aa18.95■□□□□ 0.62
CASC4-209ENST00000559222 PECAM1P16284 738 aaPredicted RBP18.95■□□□□ 0.62
CASC4-209ENST00000559222 MAT2AP31153 395 aaKnown RBP18.95■□□□□ 0.62
CASC4-209ENST00000559222 CTNNA1P35221 906 aaKnown RBP18.95■□□□□ 0.62
CASC4-209ENST00000559222 MAXP61244 160 aa18.95■□□□□ 0.62
CASC4-209ENST00000559222 IRX4P78413 519 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms