RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 TRBV5-7A0A0A0MS05 114 aa11.66□□□□□ -0.54
CASC4-208ENST00000559151 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.66□□□□□ -0.54
CASC4-208ENST00000559151 LIPT2A6NK58 231 aa11.66□□□□□ -0.54
CASC4-208ENST00000559151 PTGES3LE9PB15 166 aa11.66□□□□□ -0.54
CASC4-208ENST00000559151 LIASO43766 372 aa11.66□□□□□ -0.54
CASC4-208ENST00000559151 LCKP06239 509 aa11.66□□□□□ -0.54
CASC4-208ENST00000559151 ACTN2P35609 894 aa11.66□□□□□ -0.54
CASC4-208ENST00000559151 GDF5P43026 501 aa11.66□□□□□ -0.54
CASC4-208ENST00000559151 RAD52P43351 418 aa11.66□□□□□ -0.54
CASC4-208ENST00000559151 MC1RQ01726 317 aa11.66□□□□□ -0.54
CASC4-208ENST00000559151 NUCB1Q02818 461 aa11.66□□□□□ -0.54
CASC4-208ENST00000559151 CREB5Q02930 508 aa11.66□□□□□ -0.54
CASC4-208ENST00000559151 SLC18A2Q05940 514 aa11.66□□□□□ -0.54
CASC4-208ENST00000559151 PKP1Q13835 747 aa11.66□□□□□ -0.54
CASC4-208ENST00000559151 VEPH1Q14D04 833 aa11.66□□□□□ -0.54
CASC4-208ENST00000559151 SLC9C1Q4G0N8 1177 aa11.66□□□□□ -0.54
CASC4-208ENST00000559151 ALG10Q5BKT4 473 aa11.66□□□□□ -0.54
CASC4-208ENST00000559151 ALG10BQ5I7T1 473 aa11.66□□□□□ -0.54
CASC4-208ENST00000559151 TXNDC8Q6A555 127 aa11.66□□□□□ -0.54
CASC4-208ENST00000559151 MIS18BP1Q6P0N0 1132 aa11.66□□□□□ -0.54
CASC4-208ENST00000559151 NCEH1Q6PIU2 408 aa11.66□□□□□ -0.54
CASC4-208ENST00000559151 FAM57BQ71RH2 274 aa11.66□□□□□ -0.54
CASC4-208ENST00000559151 FRMD1Q8N878 549 aa11.66□□□□□ -0.54
CASC4-208ENST00000559151 TMEM170AQ8WVE7 144 aa11.66□□□□□ -0.54
CASC4-208ENST00000559151 SMARCE1Q969G3 411 aa11.66□□□□□ -0.54
CASC4-208ENST00000559151 PCED1AQ9H1Q7 454 aa11.66□□□□□ -0.54
CASC4-208ENST00000559151 PRKRIP1Q9H875 184 aaPredicted RBP11.66□□□□□ -0.54
CASC4-208ENST00000559151 NCKIPSDQ9NZQ3 722 aa11.66□□□□□ -0.54
CASC4-208ENST00000559151 PLEKHB1Q9UF11 243 aaPredicted RBP11.66□□□□□ -0.54
CASC4-208ENST00000559151 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.66□□□□□ -0.54
CASC4-208ENST00000559151 EIF2S1P05198 315 aaKnown RBP11.65□□□□□ -0.54
CASC4-208ENST00000559151 ZNF8P17098 575 aaPredicted RBP11.65□□□□□ -0.54
CASC4-208ENST00000559151 YWHAQP27348 245 aa11.65□□□□□ -0.54
CASC4-208ENST00000559151 TTKP33981 857 aa11.65□□□□□ -0.54
CASC4-208ENST00000559151 CEBPZQ03701 1054 aaKnown RBP11.65□□□□□ -0.54
CASC4-208ENST00000559151 RNPS1Q15287 305 aaKnown RBP11.65□□□□□ -0.54
CASC4-208ENST00000559151 ENTPD8Q5MY95 495 aa11.65□□□□□ -0.54
CASC4-208ENST00000559151 ENOSF1Q7L5Y1 443 aa11.65□□□□□ -0.54
CASC4-208ENST00000559151 CLMNQ96JQ2 1002 aa11.65□□□□□ -0.54
CASC4-208ENST00000559151 WDFY2Q96P53 400 aa11.65□□□□□ -0.54
CASC4-208ENST00000559151 IKZF4Q9H2S9 585 aa11.65□□□□□ -0.54
CASC4-208ENST00000559151 EHD2Q9NZN4 543 aa11.65□□□□□ -0.54
CASC4-208ENST00000559151 LRRC53A6NM62 1247 aa11.64□□□□□ -0.55
CASC4-208ENST00000559151 GJB3O75712 270 aa11.64□□□□□ -0.55
CASC4-208ENST00000559151 RARGP13631 454 aa11.64□□□□□ -0.55
CASC4-208ENST00000559151 PPARGP37231 505 aaPredicted RBP11.64□□□□□ -0.55
CASC4-208ENST00000559151 NLRP5P59047 1200 aa11.64□□□□□ -0.55
CASC4-208ENST00000559151 RILPL1Q5EBL4 403 aa11.64□□□□□ -0.55
CASC4-208ENST00000559151 FBXO42Q6P3S6 717 aa11.64□□□□□ -0.55
CASC4-208ENST00000559151 RASSF8Q8NHQ8 419 aa11.64□□□□□ -0.55
CASC4-208ENST00000559151 WIPF2Q8TF74 440 aaPredicted RBP11.64□□□□□ -0.55
CASC4-208ENST00000559151 ARHGEF2Q92974 986 aaKnown RBP11.64□□□□□ -0.55
CASC4-208ENST00000559151 R3HDMLQ9H3Y0 253 aa11.64□□□□□ -0.55
CASC4-208ENST00000559151 PAPOLBQ9NRJ5 636 aaKnown RBP11.64□□□□□ -0.55
CASC4-208ENST00000559151 ZNF215Q9UL58 517 aaPredicted RBP11.64□□□□□ -0.55
CASC4-208ENST00000559151 ADAM18Q9Y3Q7 739 aa11.64□□□□□ -0.55
CASC4-208ENST00000559151 hCG_1807616A0A1W2PRN6 198 aa11.63□□□□□ -0.55
CASC4-208ENST00000559151 AGAP14A8MT82 685 aa11.63□□□□□ -0.55
CASC4-208ENST00000559151 VILLO15195 856 aa11.63□□□□□ -0.55
CASC4-208ENST00000559151 FSHBP01225 129 aa11.63□□□□□ -0.55
CASC4-208ENST00000559151 PORP16435 677 aaPredicted RBP11.63□□□□□ -0.55
CASC4-208ENST00000559151 GNAQP50148 359 aa11.63□□□□□ -0.55
CASC4-208ENST00000559151 FRG1Q14331 258 aaKnown RBP11.63□□□□□ -0.55
CASC4-208ENST00000559151 WTAPQ15007 396 aa11.63□□□□□ -0.55
CASC4-208ENST00000559151 MIDNQ504T8 468 aa11.63□□□□□ -0.55
CASC4-208ENST00000559151 CEP78Q5JTW2 689 aa11.63□□□□□ -0.55
CASC4-208ENST00000559151 ISM2Q6H9L7 571 aa11.63□□□□□ -0.55
CASC4-208ENST00000559151 SZRD1Q7Z422 152 aa11.63□□□□□ -0.55
CASC4-208ENST00000559151 CCDC105Q8IYK2 499 aa11.63□□□□□ -0.55
CASC4-208ENST00000559151 KIAA2013Q8IYS2 634 aa11.63□□□□□ -0.55
CASC4-208ENST00000559151 CADM3Q8N126 398 aa11.63□□□□□ -0.55
CASC4-208ENST00000559151 SCFD2Q8WU76 684 aa11.63□□□□□ -0.55
CASC4-208ENST00000559151 GTF3C6Q969F1 213 aa11.63□□□□□ -0.55
CASC4-208ENST00000559151 FAM149B1Q96BN6 582 aa11.63□□□□□ -0.55
CASC4-208ENST00000559151 FAM120BQ96EK7 910 aaKnown RBP11.63□□□□□ -0.55
CASC4-208ENST00000559151 POLR1BQ9H9Y6 1135 aa11.63□□□□□ -0.55
CASC4-208ENST00000559151 WDR6Q9NNW5 1121 aaKnown RBP11.63□□□□□ -0.55
CASC4-208ENST00000559151 PAGE4O60829 102 aa11.62□□□□□ -0.55
CASC4-208ENST00000559151 TMCC2O75069 709 aa11.62□□□□□ -0.55
CASC4-208ENST00000559151 LATS1O95835 1130 aa11.62□□□□□ -0.55
CASC4-208ENST00000559151 PRKCGP05129 697 aa11.62□□□□□ -0.55
CASC4-208ENST00000559151 SLC16A2P36021 539 aa11.62□□□□□ -0.55
CASC4-208ENST00000559151 ELLP55199 621 aaPredicted RBP11.62□□□□□ -0.55
CASC4-208ENST00000559151 CLDN2P57739 230 aa11.62□□□□□ -0.55
CASC4-208ENST00000559151 GOLGA8DPQ0D2H9 430 aa11.62□□□□□ -0.55
CASC4-208ENST00000559151 PPP2R5BQ15173 497 aa11.62□□□□□ -0.55
CASC4-208ENST00000559151 TTC39AQ5SRH9 613 aa11.62□□□□□ -0.55
CASC4-208ENST00000559151 STRIP1Q5VSL9 837 aa11.62□□□□□ -0.55
CASC4-208ENST00000559151 RPAP2Q8IXW5 612 aaPredicted RBP11.62□□□□□ -0.55
CASC4-208ENST00000559151 DPP10Q8N608 796 aa11.62□□□□□ -0.55
CASC4-208ENST00000559151 EME1Q96AY2 570 aa11.62□□□□□ -0.55
CASC4-208ENST00000559151 FAM118BQ9BPY3 351 aa11.62□□□□□ -0.55
CASC4-208ENST00000559151 H2AFJQ9BTM1 129 aa11.62□□□□□ -0.55
CASC4-208ENST00000559151 STRA6Q9BX79 667 aa11.62□□□□□ -0.55
CASC4-208ENST00000559151 SPAG4Q9NPE6 437 aa11.62□□□□□ -0.55
CASC4-208ENST00000559151 ANKEF1Q9NU02 776 aa11.62□□□□□ -0.55
CASC4-208ENST00000559151 A0A1W2PQF6 199 aa11.61□□□□□ -0.55
CASC4-208ENST00000559151 EIF3CLB5ME19 914 aaKnown RBP11.61□□□□□ -0.55
CASC4-208ENST00000559151 RNMTO43148 476 aaKnown RBP11.61□□□□□ -0.55
CASC4-208ENST00000559151 HNRNPCL1O60812 293 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms