RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 PLRG1O43660 514 aaKnown RBP8.62□□□□□ -1.03
TPM1-213ENST00000558400 GDF9O60383 454 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 DFNA5O60443 496 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 MAGEC1O60732 1142 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 PRAMEF11O60813 436 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 RNGTTO60942 597 aaKnown RBP8.62□□□□□ -1.03
TPM1-213ENST00000558400 LEFTY1O75610 366 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 PALMO75781 387 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 FSBPO95073 299 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 LCA5LO95447 670 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 IGSF6O95976 241 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 ITGB7P26010 798 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 DRD3P35462 400 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 CSNK1DP48730 415 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 PAPOLAP51003 745 aaKnown RBP8.62□□□□□ -1.03
TPM1-213ENST00000558400 RENBPP51606 427 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 CCNHP51946 323 aaPredicted RBP8.62□□□□□ -1.03
TPM1-213ENST00000558400 ADPRHP54922 357 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 CDH6P55285 790 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 SLC25A11Q02978 314 aaKnown RBP8.62□□□□□ -1.03
TPM1-213ENST00000558400 IL10RBQ08334 325 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 NSUN2Q08J23 767 aaKnown RBP eCLIP8.62□□□□□ -1.03
TPM1-213ENST00000558400 CNTN1Q12860 1018 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 SLC14A1Q13336 389 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 DPYSQ14117 519 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 SMTNL2Q2TAL5 461 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 ODF2Q5BJF6 829 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 SLC45A4Q5BKX6 768 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 ZFYVE27Q5T4F4 411 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 LRRC38Q5VT99 294 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 AFMIDQ63HM1 303 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 FBXL19Q6PCT2 694 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 ERN2Q76MJ5 926 aaKnown RBP8.62□□□□□ -1.03
TPM1-213ENST00000558400 BBS5Q8N3I7 341 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 TXLNBQ8N3L3 684 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 RYBPQ8N488 228 aaPredicted RBP8.62□□□□□ -1.03
TPM1-213ENST00000558400 C1orf216Q8TAB5 229 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 FAM174AQ8TBP5 190 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 FAM71BQ8TC56 605 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 NSMCE1Q8WV22 266 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 RFFLQ8WZ73 363 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 SNX19Q92543 992 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 MARVELD3Q96A59 401 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 FEM1CQ96JP0 617 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 BTBD6Q96KE9 485 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 GDAP1L1Q96MZ0 367 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 ZNF599Q96NL3 588 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 EDEM2Q9BV94 578 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 PACSIN1Q9BY11 444 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 SLC39A8Q9C0K1 460 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 TNKS2Q9H2K2 1166 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 SPTLC3Q9NUV7 552 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 HAUS2Q9NVX0 235 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 UBA2Q9UBT2 640 aaPredicted RBP8.62□□□□□ -1.03
TPM1-213ENST00000558400 DMTF1Q9Y222 760 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 FCF1Q9Y324 198 aaKnown RBP8.62□□□□□ -1.03
TPM1-213ENST00000558400 BOLA1Q9Y3E2 137 aa8.62□□□□□ -1.03
TPM1-213ENST00000558400 EPN1Q9Y6I3 576 aaPredicted RBP8.62□□□□□ -1.03
TPM1-213ENST00000558400 EML5Q05BV3 1969 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 DOCK4Q8N1I0 1966 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 PLXND1Q9Y4D7 1925 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 A0A0A6YYK5 440 aaPredicted RBP8.61□□□□□ -1.03
TPM1-213ENST00000558400 C4orf47A7E2U8 309 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 DFFAO00273 331 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 KRIT1O00522 736 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 CDX4O14627 284 aaPredicted RBP8.61□□□□□ -1.03
TPM1-213ENST00000558400 RIOK3O14730 519 aaKnown RBP8.61□□□□□ -1.03
TPM1-213ENST00000558400 TM4SF5O14894 197 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 LATO43561 262 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 AP1G1O43747 822 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 OPHN1O60890 802 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 TMCC1O94876 653 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 CTSLP07711 333 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 ENGP17813 658 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 AMPD1P23109 780 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 CDC25BP30305 580 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 HSPA9P38646 679 aaKnown RBP8.61□□□□□ -1.03
TPM1-213ENST00000558400 MAPK8P45983 427 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 NOP2P46087 812 aaKnown RBP8.61□□□□□ -1.03
TPM1-213ENST00000558400 GRIA4P48058 902 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 SUOXP51687 545 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 NEK3P51956 506 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 HADHBP55084 474 aaKnown RBP8.61□□□□□ -1.03
TPM1-213ENST00000558400 RHOAP61586 193 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 OVGP1Q12889 678 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 MESDQ14696 234 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 STAT4Q14765 748 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 SETMARQ53H47 684 aaPredicted RBP8.61□□□□□ -1.03
TPM1-213ENST00000558400 ZNF805Q5CZA5 627 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 TCEAL6Q6IPX3 200 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 TRIM69Q86WT6 500 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 VSIG1Q86XK7 387 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 CHST14Q8NCH0 376 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 TSC1Q92574 1164 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 TCEAL3Q969E4 200 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 CELF6Q96J87 481 aaKnown RBP8.61□□□□□ -1.03
TPM1-213ENST00000558400 ZNF641Q96N77 438 aaPredicted RBP8.61□□□□□ -1.03
TPM1-213ENST00000558400 CSPG4P5Q96PW8 444 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 ZNF670Q9BS34 389 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 MAK16Q9BXY0 300 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms