RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 CCDC40Q4G0X9 1142 aa18.15■□□□□ 0.5
TSPAN3-204ENST00000558394 LRRC31Q6UY01 552 aa18.15■□□□□ 0.5
TSPAN3-204ENST00000558394 SETD3Q86TU7 594 aaPredicted RBP18.15■□□□□ 0.5
TSPAN3-204ENST00000558394 TBATAQ96M53 351 aa18.15■□□□□ 0.5
TSPAN3-204ENST00000558394 SLC2A13Q96QE2 648 aa18.15■□□□□ 0.5
TSPAN3-204ENST00000558394 KLF6Q99612 283 aaPredicted RBP18.15■□□□□ 0.5
TSPAN3-204ENST00000558394 PISDQ9UG56 409 aa18.15■□□□□ 0.5
TSPAN3-204ENST00000558394 ACSL6Q9UKU0 697 aa18.15■□□□□ 0.5
TSPAN3-204ENST00000558394 WASF2Q9Y6W5 498 aa18.15■□□□□ 0.5
TSPAN3-204ENST00000558394 FAM237AA0A1B0GTK4 181 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 CASC3O15234 703 aaKnown RBP18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 PMM2O15305 246 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 YY2O15391 372 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 P4HA2O15460 535 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 NOBOXO60393 691 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 GRAP2O75791 330 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 HGFP14210 728 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 PFN3P60673 137 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 KRT85P78386 507 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 PPARDQ03181 441 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 SRSF6Q13247 344 aaKnown RBP18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 PDCLQ13371 301 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 C5orf22Q49AR2 442 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 TPRG1LQ5T0D9 272 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 B3GNT8Q7Z7M8 397 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 ARHGEF19Q8IW93 802 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 PCDH20Q8N6Y1 951 aaKnown RBP18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 ARL10Q8N8L6 244 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 ZNF606Q8WXB4 792 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 RAB7BQ96AH8 199 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 SPON2Q9BUD6 331 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 LRRC61Q9BV99 259 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 C1QTNF2Q9BXJ5 285 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 FOXP3Q9BZS1 431 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 CEP44Q9C0F1 390 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 SLC25A18Q9H1K4 315 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 TCEAL2Q9H3H9 227 aaPredicted RBP18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 ASNSD1Q9NWL6 643 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 SIRPGQ9P1W8 387 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 PCDHGA4Q9Y5G9 962 aa18.14■□□□□ 0.49
TSPAN3-204ENST00000558394 A0A0D9SEW6 157 aa18.13■□□□□ 0.49
TSPAN3-204ENST00000558394 D6RAR5 112 aa18.13■□□□□ 0.49
TSPAN3-204ENST00000558394 NVLO15381 856 aaKnown RBP18.13■□□□□ 0.49
TSPAN3-204ENST00000558394 ZNF202O95125 648 aa18.13■□□□□ 0.49
TSPAN3-204ENST00000558394 RPLP0P05388 317 aaKnown RBP18.13■□□□□ 0.49
TSPAN3-204ENST00000558394 TSHRP16473 764 aa18.13■□□□□ 0.49
TSPAN3-204ENST00000558394 GNA15P30679 374 aa18.13■□□□□ 0.49
TSPAN3-204ENST00000558394 OR1E1P30953 314 aa18.13■□□□□ 0.49
TSPAN3-204ENST00000558394 BLKP51451 505 aa18.13■□□□□ 0.49
TSPAN3-204ENST00000558394 UBAP2LQ14157 1087 aaKnown RBP18.13■□□□□ 0.49
TSPAN3-204ENST00000558394 ELOCQ15369 112 aa18.13■□□□□ 0.49
TSPAN3-204ENST00000558394 TBR1Q16650 682 aa18.13■□□□□ 0.49
TSPAN3-204ENST00000558394 ALFQ53S48 1182 aa18.13■□□□□ 0.49
TSPAN3-204ENST00000558394 CARD16Q5EG05 197 aa18.13■□□□□ 0.49
TSPAN3-204ENST00000558394 ZNF658Q5TYW1 1059 aaPredicted RBP18.13■□□□□ 0.49
TSPAN3-204ENST00000558394 PARS2Q7L3T8 475 aaKnown RBP18.13■□□□□ 0.49
TSPAN3-204ENST00000558394 TFAP2DQ7Z6R9 452 aa18.13■□□□□ 0.49
TSPAN3-204ENST00000558394 SDR16C5Q8N3Y7 309 aa18.13■□□□□ 0.49
TSPAN3-204ENST00000558394 RYBPQ8N488 228 aaPredicted RBP18.13■□□□□ 0.49
TSPAN3-204ENST00000558394 ASB12Q8WXK4 309 aa18.13■□□□□ 0.49
TSPAN3-204ENST00000558394 CCDC74AQ96AQ1 378 aa18.13■□□□□ 0.49
TSPAN3-204ENST00000558394 ARHGEF26Q96DR7 871 aa18.13■□□□□ 0.49
TSPAN3-204ENST00000558394 C1QTNF7Q9BXJ2 289 aa18.13■□□□□ 0.49
TSPAN3-204ENST00000558394 CPEB1Q9BZB8 566 aaKnown RBP18.13■□□□□ 0.49
TSPAN3-204ENST00000558394 ZDHHC6Q9H6R6 413 aa18.13■□□□□ 0.49
TSPAN3-204ENST00000558394 WDCPQ9H6R7 721 aa18.13■□□□□ 0.49
TSPAN3-204ENST00000558394 TLN1Q9Y490 2541 aaKnown RBP18.12■□□□□ 0.49
TSPAN3-204ENST00000558394 TRIM49BA6NDI0 452 aa18.12■□□□□ 0.49
TSPAN3-204ENST00000558394 ALPIP09923 528 aa18.12■□□□□ 0.49
TSPAN3-204ENST00000558394 CTSEP14091 401 aa18.12■□□□□ 0.49
TSPAN3-204ENST00000558394 SERPINH1P50454 418 aaKnown RBP18.12■□□□□ 0.49
TSPAN3-204ENST00000558394 CCNHP51946 323 aaPredicted RBP18.12■□□□□ 0.49
TSPAN3-204ENST00000558394 PMS1P54277 932 aaKnown RBP18.12■□□□□ 0.49
TSPAN3-204ENST00000558394 YPEL5P62699 121 aa18.12■□□□□ 0.49
TSPAN3-204ENST00000558394 CCL7P80098 99 aa18.12■□□□□ 0.49
TSPAN3-204ENST00000558394 SLC20A2Q08357 652 aa18.12■□□□□ 0.49
TSPAN3-204ENST00000558394 PKP1Q13835 747 aa18.12■□□□□ 0.49
TSPAN3-204ENST00000558394 VASH2Q86V25 355 aa18.12■□□□□ 0.49
TSPAN3-204ENST00000558394 FSTL5Q8N475 847 aaPredicted RBP18.12■□□□□ 0.49
TSPAN3-204ENST00000558394 GTPBP4Q9BZE4 634 aaKnown RBP18.12■□□□□ 0.49
TSPAN3-204ENST00000558394 TKTL2Q9H0I9 626 aa18.12■□□□□ 0.49
TSPAN3-204ENST00000558394 LOXL2Q9Y4K0 774 aa18.12■□□□□ 0.49
TSPAN3-204ENST00000558394 UNC13CQ8NB66 2214 aa18.12■□□□□ 0.49
TSPAN3-204ENST00000558394 GP1BBP13224 206 aa18.11■□□□□ 0.49
TSPAN3-204ENST00000558394 CCKBRP32239 447 aa18.11■□□□□ 0.49
TSPAN3-204ENST00000558394 SNX16P57768 344 aa18.11■□□□□ 0.49
TSPAN3-204ENST00000558394 STIM1Q13586 685 aa18.11■□□□□ 0.49
TSPAN3-204ENST00000558394 COBLL1Q53SF7 1204 aa18.11■□□□□ 0.49
TSPAN3-204ENST00000558394 LVRNQ6Q4G3 990 aa18.11■□□□□ 0.49
TSPAN3-204ENST00000558394 MACC1Q6ZN28 852 aa18.11■□□□□ 0.49
TSPAN3-204ENST00000558394 C11orf57Q6ZUT1 292 aaPredicted RBP18.11■□□□□ 0.49
TSPAN3-204ENST00000558394 VPS36Q86VN1 386 aa18.11■□□□□ 0.49
TSPAN3-204ENST00000558394 HSCBQ8IWL3 235 aa18.11■□□□□ 0.49
TSPAN3-204ENST00000558394 EHBP1Q8NDI1 1231 aa18.11■□□□□ 0.49
TSPAN3-204ENST00000558394 OR7D4Q8NG98 312 aa18.11■□□□□ 0.49
TSPAN3-204ENST00000558394 OR6C4Q8NGE1 309 aa18.11■□□□□ 0.49
TSPAN3-204ENST00000558394 LMO3Q8TAP4 145 aa18.11■□□□□ 0.49
TSPAN3-204ENST00000558394 TMEM159Q96B96 161 aa18.11■□□□□ 0.49
TSPAN3-204ENST00000558394 KREMEN1Q96MU8 473 aa18.11■□□□□ 0.49
TSPAN3-204ENST00000558394 CLPBQ9H078 707 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms