RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 COX16Q9P0S2 106 aa10.53□□□□□ -0.72
TPM1-212ENST00000558347 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.53□□□□□ -0.72
TPM1-212ENST00000558347 NCOR2Q9Y618 2525 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 TM4SF5O14894 197 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 KHNYNO15037 678 aaKnown RBP10.52□□□□□ -0.73
TPM1-212ENST00000558347 SYNCRIPO60506 623 aaKnown RBP10.52□□□□□ -0.73
TPM1-212ENST00000558347 TCEA3O75764 348 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 RNF8O76064 485 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 APOEP02649 317 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 DESP17661 470 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 TACR2P21452 398 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 SDC4P31431 198 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 NOS2P35228 1153 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 MATKP42679 507 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 IRX4P78413 519 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 ZNF33AQ06730 810 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 LMAN2Q12907 356 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 SLC29A2Q14542 456 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 CCDC14Q49A88 953 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 FNDC3BQ53EP0 1204 aaKnown RBP10.52□□□□□ -0.73
TPM1-212ENST00000558347 TRIM61Q5EBN2 209 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 FSCBQ5H9T9 825 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 PEAR1Q5VY43 1037 aaPredicted RBP10.52□□□□□ -0.73
TPM1-212ENST00000558347 RAP1GAP2Q684P5 730 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 IL31Q6EBC2 164 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 AADACL2Q6P093 401 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 SLC36A4Q6YBV0 504 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 POLNQ7Z5Q5 900 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 METTL3Q86U44 580 aaKnown RBP10.52□□□□□ -0.73
TPM1-212ENST00000558347 CACUL1Q86Y37 369 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 CPNE8Q86YQ8 564 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 SYT12Q8IV01 421 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 SLC41A1Q8IVJ1 513 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 RHOT1Q8IXI2 618 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 LGI2Q8N0V4 545 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 CFAP52Q8N1V2 620 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 CARNMT1Q8N4J0 409 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 BBOF1Q8ND07 529 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 FIBINQ8TAL6 211 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 NT5C3BQ969T7 300 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 BTN2A3PQ96KV6 586 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 SERPINB12Q96P63 405 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 DDX50Q9BQ39 737 aaKnown RBP10.52□□□□□ -0.73
TPM1-212ENST00000558347 ADAM33Q9BZ11 813 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 FOXP3Q9BZS1 431 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 KDM4CQ9H3R0 1056 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 RRN3Q9NYV6 651 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.52□□□□□ -0.73
TPM1-212ENST00000558347 USP36Q9P275 1121 aaKnown RBP10.52□□□□□ -0.73
TPM1-212ENST00000558347 PILRBQ9UKJ0 227 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 INTS6Q9UL03 887 aaKnown RBP10.52□□□□□ -0.73
TPM1-212ENST00000558347 PLA2G4CQ9UP65 541 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 CAPN7Q9Y6W3 813 aa10.52□□□□□ -0.73
TPM1-212ENST00000558347 TYW5A2RUC4 315 aaKnown RBP10.51□□□□□ -0.73
TPM1-212ENST00000558347 KCNU1A8MYU2 1149 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 CDX4O14627 284 aaPredicted RBP10.51□□□□□ -0.73
TPM1-212ENST00000558347 LRCH4O75427 683 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 ENDOD1O94919 500 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 GAS8O95995 478 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 SHBGP04278 402 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 DLDP09622 509 aaKnown RBP10.51□□□□□ -0.73
TPM1-212ENST00000558347 TAS2R40P59535 323 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 IFT88Q13099 833 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 CAMK2GQ13555 558 aaPredicted RBP10.51□□□□□ -0.73
TPM1-212ENST00000558347 ITIH4Q14624 930 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 PPP1R7Q15435 360 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 PPM1JQ5JR12 505 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 RNF187Q5TA31 235 aaPredicted RBP10.51□□□□□ -0.73
TPM1-212ENST00000558347 OTUD1Q5VV17 481 aaPredicted RBP10.51□□□□□ -0.73
TPM1-212ENST00000558347 ICE2Q659A1 982 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 STRADAQ7RTN6 431 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 BNIPLQ7Z465 357 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 CPLX4Q7Z7G2 160 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 CHSY1Q86X52 802 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 CIR1Q86X95 450 aaPredicted RBP10.51□□□□□ -0.73
TPM1-212ENST00000558347 KATNAL2Q8IYT4 538 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 ARFGAP1Q8N6T3 406 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 SIPA1Q96FS4 1042 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 SNF8Q96H20 258 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 MYO19Q96H55 970 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 CABS1Q96KC9 395 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 HSPA12BQ96MM6 686 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 ZNF317Q96PQ6 595 aaPredicted RBP10.51□□□□□ -0.73
TPM1-212ENST00000558347 NPY6RQ99463 290 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 NSRP1Q9H0G5 558 aaKnown RBP10.51□□□□□ -0.73
TPM1-212ENST00000558347 FSCN3Q9NQT6 498 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 ITM2CQ9NQX7 267 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 DDIT4Q9NX09 232 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 WSB2Q9NYS7 404 aaPredicted RBP10.51□□□□□ -0.73
TPM1-212ENST00000558347 SPTBN2O15020 2390 aa10.51□□□□□ -0.73
TPM1-212ENST00000558347 ADAMTS9Q9P2N4 1935 aa10.5□□□□□ -0.73
TPM1-212ENST00000558347 GON4LQ3T8J9 2241 aa10.5□□□□□ -0.73
TPM1-212ENST00000558347 C4orf47A7E2U8 309 aa10.5□□□□□ -0.73
TPM1-212ENST00000558347 H0YHG0 523 aa10.5□□□□□ -0.73
TPM1-212ENST00000558347 NDC80O14777 642 aa10.5□□□□□ -0.73
TPM1-212ENST00000558347 RASGRF2O14827 1237 aa10.5□□□□□ -0.73
TPM1-212ENST00000558347 LUC7L3O95232 432 aaKnown RBP10.5□□□□□ -0.73
TPM1-212ENST00000558347 ATP5BP06576 529 aaKnown RBP10.5□□□□□ -0.73
TPM1-212ENST00000558347 POLR2EP19388 210 aaKnown RBP10.5□□□□□ -0.73
TPM1-212ENST00000558347 TFE3P19532 575 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms