RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 TTI2Q6NXR4 508 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 ZNF613Q6PF04 617 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 PAGE2Q7Z2X7 111 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 CCDC115Q96NT0 180 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 ABCB9Q9NP78 766 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 THG1LQ9NWX6 298 aaKnown RBP14.1□□□□□ -0.15
SPG11-210ENST00000558319 RAB21Q9UL25 225 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.1□□□□□ -0.15
SPG11-210ENST00000558319 AK5Q9Y6K8 562 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 CCNKO75909 580 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 EPN2O95208 641 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 PDHA2P29803 388 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 CCNHP51946 323 aaPredicted RBP14.1□□□□□ -0.15
SPG11-210ENST00000558319 PTPN11Q06124 597 aaPredicted RBP14.1□□□□□ -0.15
SPG11-210ENST00000558319 CBX3Q13185 183 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 VPS72Q15906 364 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 CXCL17Q6UXB2 119 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 COLGALT2Q8IYK4 626 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 DEFB106AQ8N104 65 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 MYLPFQ96A32 169 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 TBL1YQ9BQ87 522 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 NMRAL1Q9HBL8 299 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 HMGCRP04035 888 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 PRKAR1AP10644 381 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 COX4I1P13073 169 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 CYP2A7P20853 494 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 S100A3P33764 101 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 GP5P40197 560 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 RPL5P46777 297 aaKnown RBP14.1□□□□□ -0.15
SPG11-210ENST00000558319 ACLYP53396 1101 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 MAXP61244 160 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 TBX2Q13207 712 aaPredicted RBP14.1□□□□□ -0.15
SPG11-210ENST00000558319 ZFP69Q49AA0 526 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 P2RX7Q99572 595 aaKnown RBP14.1□□□□□ -0.15
SPG11-210ENST00000558319 TMPRSS4Q9NRS4 437 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 ARHGAP28Q9P2N2 729 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 CORO1CQ9ULV4 474 aaPredicted RBP14.1□□□□□ -0.15
SPG11-210ENST00000558319 GPR75-ASB3A0A0A6YYF3 556 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 A0A0A6YYK5 440 aaPredicted RBP14.1□□□□□ -0.15
SPG11-210ENST00000558319 LRRC14BA6NHZ5 514 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 STX11O75558 287 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 HSPA14Q0VDF9 509 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 COL9A2Q14055 689 aaPredicted RBP14.1□□□□□ -0.15
SPG11-210ENST00000558319 INTS5Q6P9B9 1019 aaKnown RBP14.1□□□□□ -0.15
SPG11-210ENST00000558319 ARMC8Q8IUR7 673 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 GAD1Q99259 594 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 BTRCQ9Y297 605 aa14.1□□□□□ -0.15
SPG11-210ENST00000558319 CHRNGP07510 517 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 PGAM1P18669 254 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 LHX1P48742 406 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 MAD2L1Q13257 205 aaPredicted RBP14.09□□□□□ -0.15
SPG11-210ENST00000558319 GCNT7Q6ZNI0 430 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 SYT12Q8IV01 421 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 MBOAT7Q96N66 472 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 ZFP14Q9HCL3 533 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 FBXO6Q9NRD1 293 aaPredicted RBP14.09□□□□□ -0.15
SPG11-210ENST00000558319 LRRC4BQ9NT99 713 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 NKIRAS2Q9NYR9 191 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 CCDC162PA2VCL2 907 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 GSAPA4D1B5 854 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 SNX3O60493 162 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 MTA2O94776 668 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 COX7A2P14406 83 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 SCNN1GP51170 649 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 GPAT3Q53EU6 434 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 MTX3Q5HYI7 312 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 CDHR5Q9HBB8 845 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 KCNK4Q9NYG8 393 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 AP4B1Q9Y6B7 739 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 GLI2P10070 1586 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 CBFA2T3O75081 653 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 NADKO95544 446 aaPredicted RBP14.09□□□□□ -0.15
SPG11-210ENST00000558319 GPR15P49685 360 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 CYP4F8P98187 520 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 SULT1C3Q6IMI6 304 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 OR56A4Q8NGH8 313 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 S100ZQ8WXG8 99 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 MNTQ99583 582 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 NAT9Q9BTE0 207 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 EGFL7Q9UHF1 273 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 NCKAP1Q9Y2A7 1128 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 FADS2O95864 444 aaKnown RBP14.09□□□□□ -0.15
SPG11-210ENST00000558319 DLG4P78352 724 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 TRAP1Q12931 704 aaKnown RBP14.09□□□□□ -0.15
SPG11-210ENST00000558319 SPANXN3Q5MJ09 141 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 RAET1GQ6H3X3 334 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 CKAP2Q8WWK9 683 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 SLC12A4Q9UP95 1085 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 STARD13Q9Y3M8 1113 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 FAM92AA1XBS5 289 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 RTN3O95197 1032 aaPredicted RBP14.09□□□□□ -0.15
SPG11-210ENST00000558319 ALADP13716 330 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 CD86P42081 329 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 BCL2L1Q07817 233 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 CBWD6Q4V339 395 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 SMYD1Q8NB12 490 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 SLC25A23Q9BV35 468 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 TNKS2Q9H2K2 1166 aa14.09□□□□□ -0.15
SPG11-210ENST00000558319 HECW2Q9P2P5 1572 aa14.08□□□□□ -0.15
SPG11-210ENST00000558319 CST1P01037 141 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms