RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 ASPMQ8IZT6 3477 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 A0A087X0T9 212 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 A0A1B0GTQ1 180 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 A0A1W2PQU0 124 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 ZSCAN5CA6NGD5 496 aaPredicted RBP8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 FGF10O15520 208 aaPredicted RBP8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 BUB1O43683 1085 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 RNGTTO60942 597 aaKnown RBP8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 LRCH4O75427 683 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 RNF8O76064 485 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 GSRP00390 522 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 FAM228BP0C875 321 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 MYBL1P10243 752 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 ITGB7P26010 798 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 GKP32189 559 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 HTR7P34969 479 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 NUDT1P36639 197 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 C21orf59P57076 290 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 GEMIN4P57678 1058 aaKnown RBP8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 TPI1P60174 286 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 CCDC15Q0P6D6 951 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 FOXC1Q12948 553 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 SERINC3Q13530 473 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 HNRNPDQ14103 355 aaKnown RBP8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 SHBQ15464 509 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 TRIP6Q15654 476 aaKnown RBP8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 TDRD12Q587J7 1177 aaKnown RBP8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 PRAMEF14Q5SWL7 426 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 NAPEPLDQ6IQ20 393 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 NEK5Q6P3R8 708 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 MFSD2AQ8NA29 543 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 NETO2Q8NC67 525 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 OR6K2Q8NGY2 324 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 BAHD1Q8TBE0 780 aaPredicted RBP8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 KLK6Q92876 244 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 IQCDQ96DY2 449 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 TRIM11Q96F44 468 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 HMCESQ96FZ2 354 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 KCTD15Q96SI1 283 aaPredicted RBP8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 SNRNP25Q9BV90 132 aaKnown RBP8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 TM6SF2Q9BZW4 377 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 XPO4Q9C0E2 1151 aaKnown RBP8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 DHX35Q9H5Z1 703 aaKnown RBP8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 LRRC19Q9H756 370 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 AASDHPPTQ9NRN7 309 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 MYO1AQ9UBC5 1043 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 PCOLCE2Q9UKZ9 415 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 ZFR2Q9UPR6 939 aaKnown RBP8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 DMTF1Q9Y222 760 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 BTBD3Q9Y2F9 522 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 LUC7L2Q9Y383 392 aaKnown RBP8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 SCINQ9Y6U3 715 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 SHROOM3Q8TF72 1996 aa8.93□□□□□ -0.98
SNRPA1-206ENST00000558059 ZZEF1O43149 2961 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 EIF3CLB5ME19 914 aaKnown RBP8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 TLR4O00206 839 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 FLRT2O43155 660 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 PRPSAP2O60256 369 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 PCDHGA12O60330 932 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 DFNA5O60443 496 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 TMCC1O94876 653 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 POP4O95707 220 aaKnown RBP8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 CYP1A2P05177 515 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 ADRB3P13945 408 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 TCF4P15884 667 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 DESP17661 470 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 SPINK2P20155 84 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 IL1R2P27930 398 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 HNRNPH3P31942 346 aaKnown RBP8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 CASP14P31944 242 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 PCK1P35558 622 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 CCT8P50990 548 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 NEK3P51956 506 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 NDST2P52849 883 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 NXPH1P58417 271 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 SNRPD1P62314 119 aaKnown RBP8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 ACAP1Q15027 740 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 CYTH1Q15438 398 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 ZNF284Q2VY69 593 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 MYLK3Q32MK0 819 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 PARP15Q460N3 678 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 TMEM259Q4ZIN3 620 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 SETMARQ53H47 684 aaPredicted RBP8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 INO80DQ53TQ3 878 aaPredicted RBP8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 ATXN7L2Q5T6C5 722 aaPredicted RBP8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 AFMIDQ63HM1 303 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 PARS2Q7L3T8 475 aaKnown RBP8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 GLRX5Q86SX6 157 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 SLCO6A1Q86UG4 719 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 HORMAD1Q86X24 394 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 SPATS2Q86XZ4 545 aaKnown RBP8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 ZNF354CQ86Y25 554 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 PSTKQ8IV42 348 aaKnown RBP8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 TMEM145Q8NBT3 493 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 OR2AP1Q8NGE2 309 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 SETD7Q8WTS6 366 aaKnown RBP8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 CASKIN2Q8WXE0 1202 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 SKA1Q96BD8 255 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 PPP1R16AQ96I34 528 aa8.92□□□□□ -0.98
SNRPA1-206ENST00000558059 LRIG1Q96JA1 1093 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms