RNA–Protein interactions for RNA: ENST00000558014.5

SEMA6D-208, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 6,028 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-208ENST00000558014 HSFY1Q96LI6 401 aa13.83□□□□□ -0.19
SEMA6D-208ENST00000558014 COL20A1Q9P218 1284 aa13.83□□□□□ -0.19
SEMA6D-208ENST00000558014 SYNPO2Q9UMS6 1093 aa13.83□□□□□ -0.19
SEMA6D-208ENST00000558014 FCF1Q9Y324 198 aaKnown RBP13.83□□□□□ -0.19
SEMA6D-208ENST00000558014 H3BN98 237 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 GTPBP1O00178 669 aaKnown RBP13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 MINDY4Q4G0A6 757 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 RNF148Q8N7C7 305 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 MYO19Q96H55 970 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 TRIT1Q9H3H1 467 aaKnown RBP13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 PRDM12Q9H4Q4 367 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 POLMQ9NP87 494 aaPredicted RBP13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 LZTS1Q9Y250 596 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 STARD13Q9Y3M8 1113 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 SIGLEC16A6NMB1 481 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 CCDC166P0CW27 439 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 HPCAL1P37235 193 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 CSTF3Q12996 717 aaKnown RBP13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 ZBTB17Q13105 803 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 PCBP1Q15365 356 aaKnown RBP eCLIP13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 SCARA3Q6AZY7 606 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 LRRC34Q8IZ02 419 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 GANQ9H2C0 597 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 ZNF510Q9Y2H8 683 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 PCDHA11Q9Y5I1 949 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 SALL3Q9BXA9 1300 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 C16orf96A6NNT2 1141 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 ERCC2P18074 760 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 SLC1A6P48664 564 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 ZNF143P52747 638 aaPredicted RBP13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 CSNK2BP67870 215 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 HDDC3Q8N4P3 179 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 CPNE1Q99829 537 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 PHACTR1Q9C0D0 580 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 YIPF3Q9GZM5 350 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 SOX13Q9UN79 622 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 ARVCFO00192 962 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 FTH1P02794 183 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 KBTBD12Q3ZCT8 623 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 STXBP5Q5T5C0 1151 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 RBM43Q6ZSC3 357 aaKnown RBP13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 PARP9Q8IXQ6 854 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 SETD7Q8WTS6 366 aaKnown RBP13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 BSNDQ8WZ55 320 aa13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 PABPC3Q9H361 631 aaKnown RBP13.83□□□□□ -0.2
SEMA6D-208ENST00000558014 CCDC154A6NI56 674 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 HACD1B0YJ81 288 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 ENPP3O14638 875 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 AGBL2Q5U5Z8 902 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 STK40Q8N2I9 435 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 LPIN3Q9BQK8 851 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 PDZD7Q9H5P4 517 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 NEUROD4Q9HD90 331 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 GEMIN8Q9NWZ8 242 aaKnown RBP13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 PCDHA2Q9Y5H9 948 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 SNX10Q9Y5X0 201 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 OR2AG2A6NM03 316 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 RGS5O15539 181 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 CRABP2P29373 138 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 RPL7AP62424 266 aaKnown RBP13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 PARP6Q2NL67 630 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 SUGP1Q8IWZ8 645 aaKnown RBP13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 NRDE2Q9H7Z3 1164 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 PHPT1Q9NRX4 125 aaPredicted RBP13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 RICTORQ6R327 1708 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 PAPSS1O43252 624 aaPredicted RBP13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 VAV1P15498 845 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 ZC3H7AQ8IWR0 971 aaKnown RBP13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 OXCT2Q9BYC2 517 aaPredicted RBP13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 RHOBTB2Q9BYZ6 727 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 EFCAB1Q9HAE3 211 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 LYVE1Q9Y5Y7 322 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 ERN1O75460 977 aaKnown RBP13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 LRATO95237 230 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 SPATA31C1P0DKV0 1188 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 ITPKBP27987 946 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 CTSOP43234 321 aaPredicted RBP13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 CLK3P49761 638 aaKnown RBP13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 PRMT2P55345 433 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 GNA13Q14344 377 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 CHST15Q7LFX5 561 aaPredicted RBP13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 FAM126BQ8IXS8 530 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 NMUR1Q9HB89 426 aa13.82□□□□□ -0.2
SEMA6D-208ENST00000558014 CCDC189A1A4V9 331 aa13.81□□□□□ -0.2
SEMA6D-208ENST00000558014 ZSCAN5CA6NGD5 496 aaPredicted RBP13.81□□□□□ -0.2
SEMA6D-208ENST00000558014 ERBB2P04626 1255 aa13.81□□□□□ -0.2
SEMA6D-208ENST00000558014 CAPN1P07384 714 aa13.81□□□□□ -0.2
SEMA6D-208ENST00000558014 DGKGP49619 791 aa13.81□□□□□ -0.2
SEMA6D-208ENST00000558014 CTBP1Q13363 440 aa13.81□□□□□ -0.2
SEMA6D-208ENST00000558014 CATSPER1Q8NEC5 780 aa13.81□□□□□ -0.2
SEMA6D-208ENST00000558014 EPS8L1Q8TE68 723 aa13.81□□□□□ -0.2
SEMA6D-208ENST00000558014 TMEM120AQ9BXJ8 343 aa13.81□□□□□ -0.2
SEMA6D-208ENST00000558014 SEMA4AQ9H3S1 761 aa13.81□□□□□ -0.2
SEMA6D-208ENST00000558014 CCDC167Q9P0B6 97 aa13.81□□□□□ -0.2
SEMA6D-208ENST00000558014 CDH3P22223 829 aa13.81□□□□□ -0.2
SEMA6D-208ENST00000558014 KELP23276 732 aa13.81□□□□□ -0.2
SEMA6D-208ENST00000558014 FSHRP23945 695 aa13.81□□□□□ -0.2
SEMA6D-208ENST00000558014 S100A5P33763 92 aa13.81□□□□□ -0.2
SEMA6D-208ENST00000558014 CAP1Q01518 475 aa13.81□□□□□ -0.2
SEMA6D-208ENST00000558014 FAAP100Q0VG06 881 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms