RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 RBPMS2Q6ZRY4 209 aaKnown RBP3.94□□□□□ -1.78
TDP1-217ENST00000557782 PTCHD4Q6ZW05 846 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 OTOAQ7RTW8 1153 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 PRSS45Q7RTY3 260 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 GPAT4Q86UL3 456 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 NLRP14Q86W24 1093 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 CARFQ8N187 725 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 TC2NQ8N9U0 490 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 IQUBQ8NA54 791 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 SETD9Q8NE22 299 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 C2CD4CQ8TF44 421 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 MR1Q95460 341 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 CTHRC1Q96CG8 243 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 ARHGEF26Q96DR7 871 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 RNF31Q96EP0 1072 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 ELMOD3Q96FG2 381 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 PRR11Q96HE9 360 aaPredicted RBP3.94□□□□□ -1.78
TDP1-217ENST00000557782 SIGLEC10Q96LC7 697 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 DIRC2Q96SL1 478 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 GAD1Q99259 594 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 ATP6V0BQ99437 205 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 MGME1Q9BQP7 344 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 PLA2G12BQ9BX93 195 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 XYLT2Q9H1B5 865 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 TNMDQ9H2S6 317 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 THAP9Q9H5L6 903 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 KIF9Q9HAQ2 790 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 USP29Q9HBJ7 922 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 IL1RAPL2Q9NP60 686 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 ABHD10Q9NUJ1 306 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 SH3BP4Q9P0V3 963 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 UPB1Q9UBR1 384 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 CCNL1Q9UK58 526 aaPredicted RBP3.94□□□□□ -1.78
TDP1-217ENST00000557782 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.94□□□□□ -1.78
TDP1-217ENST00000557782 AAR2Q9Y312 384 aaKnown RBP3.94□□□□□ -1.78
TDP1-217ENST00000557782 SH3BP1Q9Y3L3 701 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 NOX1Q9Y5S8 564 aa3.94□□□□□ -1.78
TDP1-217ENST00000557782 LOC102723996A0A087X1L8 192 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 LRRD1A4D1F6 860 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 TMEM247A6NEH6 219 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 FAM90A8PA6NJQ4 464 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 OR6C76A6NM76 312 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 PGRMC2O15173 223 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 ZNF185O15231 689 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 HCRTR2O43614 444 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 RPS6KA4O75676 772 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 ZFPL1O95159 310 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 CBX6O95503 412 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 C1RP00736 705 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 ADAP00813 363 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 IGHDP01880 384 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 ERBB2P04626 1255 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 HEXAP06865 529 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 FESP07332 822 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 PDHA1P08559 390 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 SUPT20HL2P0C7V6 817 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 FAM90A13PP0C7W8 464 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 FAM90A24PP0C7X0 464 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 SRCP12931 536 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 PPP3CBP16298 524 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 GAP43P17677 238 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 TRIM21P19474 475 aaKnown RBP3.93□□□□□ -1.78
TDP1-217ENST00000557782 CASTP20810 708 aaKnown RBP3.93□□□□□ -1.78
TDP1-217ENST00000557782 SCP2P22307 547 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 TCEA1P23193 301 aaKnown RBP3.93□□□□□ -1.78
TDP1-217ENST00000557782 APOBEC3AP31941 199 aaPredicted RBP3.93□□□□□ -1.78
TDP1-217ENST00000557782 SKIV2L2P42285 1042 aaKnown RBP3.93□□□□□ -1.78
TDP1-217ENST00000557782 EFNA5P52803 228 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 CXADRP78310 365 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 RAE1P78406 368 aaKnown RBP3.93□□□□□ -1.78
TDP1-217ENST00000557782 SHC2P98077 582 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 ITIH3Q06033 890 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 MESP2Q0VG99 397 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 CBX3Q13185 183 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 SLC14A1Q13336 389 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 RCN2Q14257 317 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 NAB2Q15742 525 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 MEP1BQ16820 701 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 SUPT20HL1Q3ZLR7 823 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 FBXO43Q4G163 708 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 TREML2Q5T2D2 321 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 ARMC4Q5T2S8 1044 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 ZNF618Q5T7W0 954 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 MEX3CQ5U5Q3 659 aaKnown RBP3.93□□□□□ -1.78
TDP1-217ENST00000557782 SP5Q6BEB4 398 aaPredicted RBP3.93□□□□□ -1.78
TDP1-217ENST00000557782 ABRAXAS1Q6UWZ7 409 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 RNF144BQ7Z419 303 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 MAVSQ7Z434 540 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 NEK8Q86SG6 692 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 IQCHQ86VS3 1027 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 TMEM200AQ86VY9 491 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 GSPT2Q8IYD1 628 aaKnown RBP3.93□□□□□ -1.78
TDP1-217ENST00000557782 LAS2Q8IYD9 372 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 MMP21Q8N119 569 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 SIX6OS1Q8N1H7 587 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 ANKRD35Q8N283 1001 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 D2HGDHQ8N465 521 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 SCAIQ8N9R8 606 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 CAMKVQ8NCB2 501 aa3.93□□□□□ -1.78
TDP1-217ENST00000557782 ANKRD20A12PQ8NF67 263 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms