RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 PPM1HQ9ULR3 514 aa14.32□□□□□ -0.12
SUPT16H-208ENST00000557652 TPX2Q9ULW0 747 aaKnown RBP14.32□□□□□ -0.12
SUPT16H-208ENST00000557652 FCF1Q9Y324 198 aaKnown RBP14.32□□□□□ -0.12
SUPT16H-208ENST00000557652 TRPM6Q9BX84 2022 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 TCRBV21S2A2A0A5A6 115 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 K7ERQ8 282 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 K7ESF4 209 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 SLC7A4O43246 635 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 OPHN1O60890 802 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 SOCS5O75159 536 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 IGLV3-19P01714 112 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 DNTTP04053 509 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 ITGAVP06756 1048 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 CR2P20023 1033 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 OXTRP30559 389 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 CXCR5P32302 372 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 WASP42768 502 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 PAFAH1B1P43034 410 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 CCNHP51946 323 aaPredicted RBP14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 COPAP53621 1224 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 MYLK3Q32MK0 819 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 ITPRIPL1Q6GPH6 555 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 DARS2Q6PI48 645 aaKnown RBP14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 DPY19L3Q6ZPD9 716 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 SRLQ86TD4 932 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 ZC3H18Q86VM9 953 aaKnown RBP14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 C12orf50Q8NA57 414 aaPredicted RBP14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 NELL1Q92832 810 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 RTP4Q96DX8 246 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 SIPA1Q96FS4 1042 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 MRGPRX1Q96LB2 322 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 TEKT5Q96M29 485 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 RUNDC3BQ96NL0 473 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 FAM129BQ96TA1 746 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 ATP13A3Q9H7F0 1226 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 RBM22Q9NW64 420 aaKnown RBP eCLIP14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 SAE1Q9UBE0 346 aaPredicted RBP14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 DKK3Q9UBP4 350 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 IL36AQ9UHA7 158 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 FZD4Q9ULV1 537 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 ATP8A1Q9Y2Q0 1164 aa14.31□□□□□ -0.12
SUPT16H-208ENST00000557652 FAM86C2PA6NEL3 165 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 C5orf60A6NFR6 353 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 AXIN1O15169 862 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 LIASO43766 372 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 MAP3K6O95382 1288 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 JCHAINP01591 159 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 ACADMP11310 421 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 TDGF1P13385 188 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 GABRG2P18507 467 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 COL9A1P20849 921 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 SERPINA4P29622 427 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 ACTN2P35609 894 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 LLGL1Q15334 1064 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 SIX1Q15475 284 aaPredicted RBP14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 OASLQ15646 514 aaKnown RBP14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 CST6Q15828 149 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 CYP1B1Q16678 543 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 KIAA1211LQ6NV74 962 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 SYT10Q6XYQ8 523 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 WDR5BQ86VZ2 330 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 LONP2Q86WA8 852 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 STK40Q8N2I9 435 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 TSEN2Q8NCE0 465 aaKnown RBP14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 RAB7BQ96AH8 199 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 LRRC45Q96CN5 670 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 C16orf45Q96MC5 204 aaPredicted RBP14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 TM6SF2Q9BZW4 377 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 MKRN2Q9H000 416 aaKnown RBP14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 PCED1AQ9H1Q7 454 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 SLC25A51Q9H1U9 297 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 KDM4CQ9H3R0 1056 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 DYRK4Q9NR20 520 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 VPS45Q9NRW7 570 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 BCCIPQ9P287 314 aaKnown RBP eCLIP14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 NCKAP1Q9Y2A7 1128 aa14.3□□□□□ -0.12
SUPT16H-208ENST00000557652 NUMA1Q14980 2115 aa14.29□□□□□ -0.12
SUPT16H-208ENST00000557652 GOLGA6CA6NDK9 693 aa14.29□□□□□ -0.12
SUPT16H-208ENST00000557652 GOLGA6BA6NDN3 693 aa14.29□□□□□ -0.12
SUPT16H-208ENST00000557652 CCDC188H7C350 402 aa14.29□□□□□ -0.12
SUPT16H-208ENST00000557652 KCNK1O00180 336 aa14.29□□□□□ -0.12
SUPT16H-208ENST00000557652 INSIG1O15503 277 aa14.29□□□□□ -0.12
SUPT16H-208ENST00000557652 GCATO75600 419 aa14.29□□□□□ -0.12
SUPT16H-208ENST00000557652 SERPINF2P08697 491 aa14.29□□□□□ -0.12
SUPT16H-208ENST00000557652 GOLGA6DP0CG33 693 aa14.29□□□□□ -0.12
SUPT16H-208ENST00000557652 NDUFV2P19404 249 aa14.29□□□□□ -0.12
SUPT16H-208ENST00000557652 ITGB7P26010 798 aa14.29□□□□□ -0.12
SUPT16H-208ENST00000557652 PTPN3P26045 913 aa14.29□□□□□ -0.12
SUPT16H-208ENST00000557652 FNTAP49354 379 aa14.29□□□□□ -0.12
SUPT16H-208ENST00000557652 RPL26P61254 145 aaKnown RBP14.29□□□□□ -0.12
SUPT16H-208ENST00000557652 RPS14P62263 151 aaKnown RBP14.29□□□□□ -0.12
SUPT16H-208ENST00000557652 POLR2LP62875 67 aaKnown RBP14.29□□□□□ -0.12
SUPT16H-208ENST00000557652 P3H1Q32P28 736 aa14.29□□□□□ -0.12
SUPT16H-208ENST00000557652 USP39Q53GS9 565 aaKnown RBP14.29□□□□□ -0.12
SUPT16H-208ENST00000557652 ZNF805Q5CZA5 627 aa14.29□□□□□ -0.12
SUPT16H-208ENST00000557652 ANO7Q6IWH7 933 aa14.29□□□□□ -0.12
SUPT16H-208ENST00000557652 BRAT1Q6PJG6 821 aa14.29□□□□□ -0.12
SUPT16H-208ENST00000557652 ZC3H14Q6PJT7 736 aaKnown RBP14.29□□□□□ -0.12
SUPT16H-208ENST00000557652 C17orf53Q8N3J3 647 aaPredicted RBP14.29□□□□□ -0.12
SUPT16H-208ENST00000557652 ZNF366Q8N895 744 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms