RNA–Protein interactions for RNA: ENST00000557592.5

APEX1-220, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-220ENST00000557592 ZBTB16Q05516 673 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 RAD51Q06609 339 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 ITKQ08881 620 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 ZBTB17Q13105 803 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 XRCC4Q13426 336 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 LONRF2Q1L5Z9 754 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 POM121L1PQ3SYA9 428 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 TTC31Q49AM3 519 aaPredicted RBP11.51□□□□□ -0.57
APEX1-220ENST00000557592 USP39Q53GS9 565 aaKnown RBP11.51□□□□□ -0.57
APEX1-220ENST00000557592 SLC45A4Q5BKX6 768 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 ARSIQ5FYB1 569 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 FAM46CQ5VWP2 391 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 DARS2Q6PI48 645 aaKnown RBP11.51□□□□□ -0.57
APEX1-220ENST00000557592 SRLQ86TD4 932 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 WDR5BQ86VZ2 330 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 CDKL3Q8IVW4 592 aaPredicted RBP11.51□□□□□ -0.57
APEX1-220ENST00000557592 PLPP6Q8IY26 295 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 PGBD5Q8N414 524 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.51□□□□□ -0.57
APEX1-220ENST00000557592 TEX26Q8N6G2 289 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 TMIEQ8NEW7 156 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 PIP4K2CQ8TBX8 421 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 GANCQ8TET4 914 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 HTR3CQ8WXA8 447 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 RLN3Q8WXF3 142 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 ZNF419Q96HQ0 510 aaPredicted RBP11.51□□□□□ -0.57
APEX1-220ENST00000557592 OSBPL9Q96SU4 736 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 CEP41Q9BYV8 373 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 PABPC3Q9H361 631 aaKnown RBP11.51□□□□□ -0.57
APEX1-220ENST00000557592 C10orf88Q9H8K7 445 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 CD93Q9NPY3 652 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 HAUS2Q9NVX0 235 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 ZSCAN32Q9NX65 697 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.51□□□□□ -0.57
APEX1-220ENST00000557592 SARDHQ9UL12 918 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 PPM1HQ9ULR3 514 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 SNX12Q9UMY4 172 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 INVSQ9Y283 1065 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 WASF2Q9Y6W5 498 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 VPS13AQ96RL7 3174 aa11.51□□□□□ -0.57
APEX1-220ENST00000557592 ANKRD36A6QL64 1941 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 WDR87Q6ZQQ6 2873 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 MTSS1O43312 755 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 ZNF217O75362 1048 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 GJB3O75712 270 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 RNASEH2AO75792 299 aaKnown RBP11.5□□□□□ -0.57
APEX1-220ENST00000557592 HLA-DQB2P05538 268 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 UGT2B4P06133 528 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 RBP3P10745 1247 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 C5AR1P21730 350 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 RBL1P28749 1068 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 SLC8A1P32418 973 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 CSNK1DP48730 415 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 TPMTP51580 245 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 METAP1P53582 386 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 NSUN2Q08J23 767 aaKnown RBP eCLIP11.5□□□□□ -0.57
APEX1-220ENST00000557592 FAM182AQ5T1J6 154 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 FAM124AQ86V42 546 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 COG1Q8WTW3 980 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 MAIP1Q8WWC4 291 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 ATG4AQ8WYN0 398 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 NELL1Q92832 810 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 MS4A14Q96JA4 679 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 SPACA7Q96KW9 195 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 OMDQ99983 421 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 FERMT1Q9BQL6 677 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 MGME1Q9BQP7 344 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 POLR1EQ9GZS1 481 aaKnown RBP11.5□□□□□ -0.57
APEX1-220ENST00000557592 SCUBE2Q9NQ36 999 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 SCML1Q9UN30 329 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 CYP8B1Q9UNU6 501 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 HCN4Q9Y3Q4 1203 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 PCDHGA2Q9Y5H1 932 aa11.5□□□□□ -0.57
APEX1-220ENST00000557592 PLXND1Q9Y4D7 1925 aa11.49□□□□□ -0.57
APEX1-220ENST00000557592 A0A1W2PP55 124 aa11.49□□□□□ -0.57
APEX1-220ENST00000557592 RNF103O00237 685 aa11.49□□□□□ -0.57
APEX1-220ENST00000557592 PGRMC1O00264 195 aaKnown RBP11.49□□□□□ -0.57
APEX1-220ENST00000557592 PLK4O00444 970 aa11.49□□□□□ -0.57
APEX1-220ENST00000557592 KCNN4O15554 427 aa11.49□□□□□ -0.57
APEX1-220ENST00000557592 LIASO43766 372 aa11.49□□□□□ -0.57
APEX1-220ENST00000557592 RPP40O75818 363 aaKnown RBP11.49□□□□□ -0.57
APEX1-220ENST00000557592 PIGNO95427 931 aa11.49□□□□□ -0.57
APEX1-220ENST00000557592 TCP1P17987 556 aaKnown RBP11.49□□□□□ -0.57
APEX1-220ENST00000557592 PTPN3P26045 913 aa11.49□□□□□ -0.57
APEX1-220ENST00000557592 P2RY2P41231 377 aa11.49□□□□□ -0.57
APEX1-220ENST00000557592 MAPK8P45983 427 aa11.49□□□□□ -0.57
APEX1-220ENST00000557592 AP1S1P61966 158 aa11.49□□□□□ -0.57
APEX1-220ENST00000557592 ETF1P62495 437 aaKnown RBP11.49□□□□□ -0.57
APEX1-220ENST00000557592 TCF15Q12870 199 aa11.49□□□□□ -0.57
APEX1-220ENST00000557592 SFSWAPQ12872 951 aaKnown RBP11.49□□□□□ -0.57
APEX1-220ENST00000557592 SRSF5Q13243 272 aaKnown RBP11.49□□□□□ -0.57
APEX1-220ENST00000557592 SNX1Q13596 522 aa11.49□□□□□ -0.57
APEX1-220ENST00000557592 BYSLQ13895 437 aaKnown RBP11.49□□□□□ -0.57
APEX1-220ENST00000557592 GRM3Q14832 879 aa11.49□□□□□ -0.57
APEX1-220ENST00000557592 NUMA1Q14980 2115 aa11.49□□□□□ -0.57
APEX1-220ENST00000557592 PAPD7Q5XG87 772 aaKnown RBP11.49□□□□□ -0.57
APEX1-220ENST00000557592 GDPD4Q6W3E5 623 aa11.49□□□□□ -0.57
APEX1-220ENST00000557592 SYT10Q6XYQ8 523 aa11.49□□□□□ -0.57
APEX1-220ENST00000557592 RASGEF1CQ8N431 466 aa11.49□□□□□ -0.57
APEX1-220ENST00000557592 HDDC3Q8N4P3 179 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms