RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 CELF6Q96J87 481 aaKnown RBP8.48□□□□□ -1.05
PSEN1-223ENST00000557511 LRIG1Q96JA1 1093 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 GDAP1L1Q96MZ0 367 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 PEBP4Q96S96 227 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 FAM129BQ96TA1 746 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 CINPQ9BW66 212 aaPredicted RBP8.48□□□□□ -1.05
PSEN1-223ENST00000557511 MAGEB5Q9BZ81 275 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 TM6SF2Q9BZW4 377 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 TNKS2Q9H2K2 1166 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 ZDHHC6Q9H6R6 413 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 OSGEPQ9NPF4 335 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 DDX56Q9NY93 547 aaKnown RBP8.48□□□□□ -1.05
PSEN1-223ENST00000557511 CWC15Q9P013 229 aaKnown RBP8.48□□□□□ -1.05
PSEN1-223ENST00000557511 MBD1Q9UIS9 605 aaPredicted RBP8.48□□□□□ -1.05
PSEN1-223ENST00000557511 NENFQ9UMX5 172 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 SLC6A14Q9UN76 642 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.48□□□□□ -1.05
PSEN1-223ENST00000557511 MAP4K5Q9Y4K4 846 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 PCDHA13Q9Y5I0 950 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 EPN1Q9Y6I3 576 aaPredicted RBP8.48□□□□□ -1.05
PSEN1-223ENST00000557511 ATG2BQ96BY7 2078 aa8.48□□□□□ -1.05
PSEN1-223ENST00000557511 TBC1D3DA0A087WVF3 549 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 TBC1D3IA0A087WXS9 549 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 TBC1D3EA0A087X179 549 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 TBC1D3KA0A087X1G2 549 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 TBC1D3FA6NER0 549 aaPredicted RBP8.47□□□□□ -1.05
PSEN1-223ENST00000557511 TBC1D3LB9A6J9 549 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 K7ERQ8 282 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 KRIT1O00522 736 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 NEMP1O14524 444 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 SMAD6O43541 496 aaKnown RBP8.47□□□□□ -1.05
PSEN1-223ENST00000557511 PALMO75781 387 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 ZMPSTE24O75844 475 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 NDUFA10O95299 355 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 POP4O95707 220 aaKnown RBP8.47□□□□□ -1.05
PSEN1-223ENST00000557511 GSRP00390 522 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 TBC1D3HP0C7X1 549 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 TNNT1P13805 278 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 VAV1P15498 845 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 GLDCP23378 1020 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 ITPKAP23677 461 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 IL1R2P27930 398 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 NUDT1P36639 197 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 CETN2P41208 172 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 PTGER3P43115 390 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 PAPOLAP51003 745 aaKnown RBP8.47□□□□□ -1.05
PSEN1-223ENST00000557511 RENBPP51606 427 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 CCNHP51946 323 aaPredicted RBP8.47□□□□□ -1.05
PSEN1-223ENST00000557511 ARF5P84085 180 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 RFTN1Q14699 578 aaPredicted RBP8.47□□□□□ -1.05
PSEN1-223ENST00000557511 GRM3Q14832 879 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 TRIM61Q5EBN2 209 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 DCAF12L1Q5VU92 463 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 DAB2IPQ5VWQ8 1189 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 TBC1D3GQ6DHY5 549 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 TBC1D3CQ6IPX1 549 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 FBXL19Q6PCT2 694 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 POLNQ7Z5Q5 900 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 PRPF39Q86UA1 669 aaKnown RBP8.47□□□□□ -1.05
PSEN1-223ENST00000557511 LRRC49Q8IUZ0 686 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 RHOT1Q8IXI2 618 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 TBC1D3Q8IZP1 549 aaPredicted RBP8.47□□□□□ -1.05
PSEN1-223ENST00000557511 ATPAF2Q8N5M1 289 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 ARFGAP1Q8N6T3 406 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 OR2AP1Q8NGE2 309 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 OR2A12Q8NGT7 310 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 GRIN3AQ8TCU5 1115 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 NETO1Q8TDF5 533 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 ZNF670Q9BS34 389 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 OSBPL1AQ9BXW6 950 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 NEUROG2Q9H2A3 272 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 PCDH18Q9HCL0 1135 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 NDFIP2Q9NV92 336 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 ZNF212Q9UDV6 495 aa8.47□□□□□ -1.05
PSEN1-223ENST00000557511 IPO11Q9UI26 975 aaKnown RBP8.47□□□□□ -1.05
PSEN1-223ENST00000557511 A0A0A6YYK5 440 aaPredicted RBP8.46□□□□□ -1.06
PSEN1-223ENST00000557511 A0A1B0GTW7 788 aa8.46□□□□□ -1.06
PSEN1-223ENST00000557511 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.46□□□□□ -1.06
PSEN1-223ENST00000557511 LRRD1A4D1F6 860 aa8.46□□□□□ -1.06
PSEN1-223ENST00000557511 GOLGA6L3A6NEY3 463 aa8.46□□□□□ -1.06
PSEN1-223ENST00000557511 SOWAHDA6NJG2 315 aa8.46□□□□□ -1.06
PSEN1-223ENST00000557511 METTL12A8MUP2 240 aa8.46□□□□□ -1.06
PSEN1-223ENST00000557511 PRAMEF11O60813 436 aa8.46□□□□□ -1.06
PSEN1-223ENST00000557511 LEFTY1O75610 366 aa8.46□□□□□ -1.06
PSEN1-223ENST00000557511 MTA2O94776 668 aa8.46□□□□□ -1.06
PSEN1-223ENST00000557511 TMCC1O94876 653 aa8.46□□□□□ -1.06
PSEN1-223ENST00000557511 KRT1P04264 644 aa8.46□□□□□ -1.06
PSEN1-223ENST00000557511 ZFXP17010 805 aaPredicted RBP8.46□□□□□ -1.06
PSEN1-223ENST00000557511 MX2P20592 715 aa8.46□□□□□ -1.06
PSEN1-223ENST00000557511 AMPD1P23109 780 aa8.46□□□□□ -1.06
PSEN1-223ENST00000557511 NFKBIAP25963 317 aa8.46□□□□□ -1.06
PSEN1-223ENST00000557511 ACSL1P33121 698 aa8.46□□□□□ -1.06
PSEN1-223ENST00000557511 MAPK8P45983 427 aa8.46□□□□□ -1.06
PSEN1-223ENST00000557511 NEK3P51956 506 aa8.46□□□□□ -1.06
PSEN1-223ENST00000557511 SLC25A11Q02978 314 aaKnown RBP8.46□□□□□ -1.06
PSEN1-223ENST00000557511 IL10RBQ08334 325 aa8.46□□□□□ -1.06
PSEN1-223ENST00000557511 KIF5AQ12840 1032 aa8.46□□□□□ -1.06
PSEN1-223ENST00000557511 ZNF235Q14590 738 aa8.46□□□□□ -1.06
PSEN1-223ENST00000557511 CCDC6Q16204 474 aa8.46□□□□□ -1.06
PSEN1-223ENST00000557511 MYLK3Q32MK0 819 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms