RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 SYNDIG1Q9H7V2 258 aa14.35□□□□□ -0.11
SLIRP-210ENST00000557431 POLR1BQ9H9Y6 1135 aa14.35□□□□□ -0.11
SLIRP-210ENST00000557431 WDR70Q9NW82 654 aa14.35□□□□□ -0.11
SLIRP-210ENST00000557431 IPO11Q9UI26 975 aaKnown RBP14.35□□□□□ -0.11
SLIRP-210ENST00000557431 ENTPD2Q9Y5L3 495 aa14.35□□□□□ -0.11
SLIRP-210ENST00000557431 ZFC3H1O60293 1989 aaKnown RBP14.34□□□□□ -0.11
SLIRP-210ENST00000557431 IGLV3-10A0A075B6K4 115 aa14.34□□□□□ -0.11
SLIRP-210ENST00000557431 SPTY2D1-AS1A0A0U1RR47 76 aa14.34□□□□□ -0.11
SLIRP-210ENST00000557431 AGRPO00253 132 aa14.34□□□□□ -0.11
SLIRP-210ENST00000557431 AQP9O43315 295 aa14.34□□□□□ -0.11
SLIRP-210ENST00000557431 GJB6O95452 261 aa14.34□□□□□ -0.11
SLIRP-210ENST00000557431 CSF2P04141 144 aa14.34□□□□□ -0.11
SLIRP-210ENST00000557431 CELA2BP08218 269 aaPredicted RBP14.34□□□□□ -0.11
SLIRP-210ENST00000557431 NME1P15531 152 aaKnown RBP14.34□□□□□ -0.11
SLIRP-210ENST00000557431 ITGB7P26010 798 aa14.34□□□□□ -0.11
SLIRP-210ENST00000557431 LSSP48449 732 aa14.34□□□□□ -0.11
SLIRP-210ENST00000557431 CLCN6P51797 869 aa14.34□□□□□ -0.11
SLIRP-210ENST00000557431 RPS21P63220 83 aaKnown RBP14.34□□□□□ -0.11
SLIRP-210ENST00000557431 ATP11AP98196 1134 aa14.34□□□□□ -0.11
SLIRP-210ENST00000557431 RAPGEF1Q13905 1077 aa14.34□□□□□ -0.11
SLIRP-210ENST00000557431 BECN1Q14457 450 aa14.34□□□□□ -0.11
SLIRP-210ENST00000557431 CDO1Q16878 200 aa14.34□□□□□ -0.11
SLIRP-210ENST00000557431 CARD16Q5EG05 197 aa14.34□□□□□ -0.11
SLIRP-210ENST00000557431 BROXQ5VW32 411 aa14.34□□□□□ -0.11
SLIRP-210ENST00000557431 KIAA1161Q6NSJ0 714 aa14.34□□□□□ -0.11
SLIRP-210ENST00000557431 DPY19L2P1Q6NXN4 242 aa14.34□□□□□ -0.11
SLIRP-210ENST00000557431 PARGQ86W56 976 aa14.34□□□□□ -0.11
SLIRP-210ENST00000557431 NT5C3BQ969T7 300 aa14.34□□□□□ -0.11
SLIRP-210ENST00000557431 VOPP1Q96AW1 172 aa14.34□□□□□ -0.11
SLIRP-210ENST00000557431 PRR11Q96HE9 360 aaPredicted RBP14.34□□□□□ -0.11
SLIRP-210ENST00000557431 RWDD2AQ9UIY3 292 aa14.34□□□□□ -0.11
SLIRP-210ENST00000557431 FHOD1Q9Y613 1164 aa14.34□□□□□ -0.11
SLIRP-210ENST00000557431 HS3ST3A1Q9Y663 406 aa14.34□□□□□ -0.11
SLIRP-210ENST00000557431 ILVBLA1L0T0 632 aa14.33□□□□□ -0.12
SLIRP-210ENST00000557431 NEMP2A6NFY4 417 aa14.33□□□□□ -0.12
SLIRP-210ENST00000557431 C16orf96A6NNT2 1141 aa14.33□□□□□ -0.12
SLIRP-210ENST00000557431 ERVH48-1M5A8F1 160 aa14.33□□□□□ -0.12
SLIRP-210ENST00000557431 GCATO75600 419 aa14.33□□□□□ -0.12
SLIRP-210ENST00000557431 FGFR1OPO95684 399 aaKnown RBP14.33□□□□□ -0.12
SLIRP-210ENST00000557431 IGFALSP35858 605 aa14.33□□□□□ -0.12
SLIRP-210ENST00000557431 GNA12Q03113 381 aa14.33□□□□□ -0.12
SLIRP-210ENST00000557431 CCDC15Q0P6D6 951 aa14.33□□□□□ -0.12
SLIRP-210ENST00000557431 C15orf59Q2T9L4 293 aaPredicted RBP14.33□□□□□ -0.12
SLIRP-210ENST00000557431 SLC25A52Q3SY17 297 aa14.33□□□□□ -0.12
SLIRP-210ENST00000557431 ATXN7L2Q5T6C5 722 aaPredicted RBP14.33□□□□□ -0.12
SLIRP-210ENST00000557431 ZCCHC8Q6NZY4 707 aaKnown RBP14.33□□□□□ -0.12
SLIRP-210ENST00000557431 VPS36Q86VN1 386 aa14.33□□□□□ -0.12
SLIRP-210ENST00000557431 PCDH20Q8N6Y1 951 aaKnown RBP14.33□□□□□ -0.12
SLIRP-210ENST00000557431 FAM181AQ8N9Y4 354 aa14.33□□□□□ -0.12
SLIRP-210ENST00000557431 C18orf8Q96DM3 657 aa14.33□□□□□ -0.12
SLIRP-210ENST00000557431 PGAP3Q96FM1 320 aaPredicted RBP14.33□□□□□ -0.12
SLIRP-210ENST00000557431 FEM1CQ96JP0 617 aa14.33□□□□□ -0.12
SLIRP-210ENST00000557431 DUSP23Q9BVJ7 150 aa14.33□□□□□ -0.12
SLIRP-210ENST00000557431 ZYG11BQ9C0D3 744 aa14.33□□□□□ -0.12
SLIRP-210ENST00000557431 METTL5Q9NRN9 209 aaKnown RBP14.33□□□□□ -0.12
SLIRP-210ENST00000557431 DNAI1Q9UI46 699 aa14.33□□□□□ -0.12
SLIRP-210ENST00000557431 AHCTF1Q8WYP5 2266 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 KALRNO60229 2985 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 FAM72CH0Y354 149 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 H3BM21 787 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 KRIT1O00522 736 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 NEMP1O14524 444 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 FPGTO14772 594 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 DXOO77932 396 aaKnown RBP14.32□□□□□ -0.12
SLIRP-210ENST00000557431 UGT2B4P06133 528 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 GP1BAP07359 652 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 MMEP08473 750 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 CYP11B1P15538 503 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 RABIFP47224 123 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 DUSP3P51452 185 aaPredicted RBP14.32□□□□□ -0.12
SLIRP-210ENST00000557431 PDX1P52945 283 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 ADKP55263 362 aaKnown RBP14.32□□□□□ -0.12
SLIRP-210ENST00000557431 FAM72AQ5TYM5 149 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 FAM72DQ6L9T8 149 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 RETSATQ6NUM9 610 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 FAM72BQ86X60 149 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 SLC35F3Q8IY50 421 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 FAM71AQ8IYT1 594 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 TMEM35BQ8NCS4 154 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 LSM14AQ8ND56 463 aaKnown RBP14.32□□□□□ -0.12
SLIRP-210ENST00000557431 CPA5Q8WXQ8 436 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 TTC9Q92623 222 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 IFT43Q96FT9 208 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 FAM81BQ96LP2 452 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 KLHL32Q96NJ5 620 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 IL12RB2Q99665 862 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 LRRC61Q9BV99 259 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 MBNL1Q9NR56 388 aaKnown RBP14.32□□□□□ -0.12
SLIRP-210ENST00000557431 RRN3Q9NYV6 651 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 APOBEC3BQ9UH17 382 aaKnown RBP14.32□□□□□ -0.12
SLIRP-210ENST00000557431 COQ6Q9Y2Z9 468 aa14.32□□□□□ -0.12
SLIRP-210ENST00000557431 FLNBO75369 2602 aaKnown RBP14.32□□□□□ -0.12
SLIRP-210ENST00000557431 EME2A4GXA9 379 aaPredicted RBP14.31□□□□□ -0.12
SLIRP-210ENST00000557431 J3QKU1 62 aa14.31□□□□□ -0.12
SLIRP-210ENST00000557431 MMP20O60882 483 aa14.31□□□□□ -0.12
SLIRP-210ENST00000557431 CDH5P33151 784 aaPredicted RBP14.31□□□□□ -0.12
SLIRP-210ENST00000557431 GABRB2P47870 512 aa14.31□□□□□ -0.12
SLIRP-210ENST00000557431 ERVPABLB-1P60509 514 aa14.31□□□□□ -0.12
SLIRP-210ENST00000557431 PFN3P60673 137 aa14.31□□□□□ -0.12
SLIRP-210ENST00000557431 SRSF6Q13247 344 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms