RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 PKNOX1P55347 436 aa8.68□□□□□ -1.02
MARK3-210ENST00000556463 PPP1R3AQ16821 1122 aa8.68□□□□□ -1.02
MARK3-210ENST00000556463 SH3PXD2AQ5TCZ1 1133 aa8.68□□□□□ -1.02
MARK3-210ENST00000556463 NXNQ6DKJ4 435 aa8.68□□□□□ -1.02
MARK3-210ENST00000556463 SULT1C3Q6IMI6 304 aa8.68□□□□□ -1.02
MARK3-210ENST00000556463 CCDC60Q8IWA6 550 aaPredicted RBP8.68□□□□□ -1.02
MARK3-210ENST00000556463 ZNF781Q8N8C0 355 aa8.68□□□□□ -1.02
MARK3-210ENST00000556463 KYQ8NBH2 561 aa8.68□□□□□ -1.02
MARK3-210ENST00000556463 PRMT6Q96LA8 375 aaPredicted RBP8.68□□□□□ -1.02
MARK3-210ENST00000556463 SERPINI1Q99574 410 aa8.68□□□□□ -1.02
MARK3-210ENST00000556463 ITM2CQ9NQX7 267 aa8.68□□□□□ -1.02
MARK3-210ENST00000556463 KRBA1A5PL33 1030 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 SNTNA6NMZ2 147 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 A8MV72 311 aaPredicted RBP8.67□□□□□ -1.02
MARK3-210ENST00000556463 HOXC6P09630 235 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 SEPHS1P49903 392 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 NDST2P52849 883 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 RAD23AP54725 363 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 LSM3P62310 102 aaKnown RBP8.67□□□□□ -1.02
MARK3-210ENST00000556463 NHSL2Q5HYW2 709 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 RWDD4Q6NW29 188 aaKnown RBP8.67□□□□□ -1.02
MARK3-210ENST00000556463 USP43Q70EL4 1123 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 SETD3Q86TU7 594 aaPredicted RBP8.67□□□□□ -1.02
MARK3-210ENST00000556463 RALGPS2Q86X27 583 aaPredicted RBP8.67□□□□□ -1.02
MARK3-210ENST00000556463 OR52B2Q96RD2 323 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 MTG1Q9BT17 334 aaPredicted RBP8.67□□□□□ -1.02
MARK3-210ENST00000556463 MSTO1Q9BUK6 570 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 GLIS2Q9BZE0 524 aaPredicted RBP8.67□□□□□ -1.02
MARK3-210ENST00000556463 TP63Q9H3D4 680 aaPredicted RBP8.67□□□□□ -1.02
MARK3-210ENST00000556463 EIF2B3Q9NR50 452 aaKnown RBP8.67□□□□□ -1.02
MARK3-210ENST00000556463 VPS45Q9NRW7 570 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 ASNSD1Q9NWL6 643 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 DUS2Q9NX74 493 aaKnown RBP8.67□□□□□ -1.02
MARK3-210ENST00000556463 MORF4L1Q9UBU8 362 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 SEPT3Q9UH03 358 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 FBXO40Q9UH90 709 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 PCSK1NQ9UHG2 260 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 PSAT1Q9Y617 370 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 PMF1-BGLAPU3KQ54 211 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 TSPAN4O14817 238 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 ACSL4O60488 711 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 NPR1P16066 1061 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 ZNF182P17025 639 aaPredicted RBP8.67□□□□□ -1.02
MARK3-210ENST00000556463 GRIA1P42261 906 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 EMC2Q15006 297 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 STILQ15468 1287 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 C15orf59Q2T9L4 293 aaPredicted RBP8.67□□□□□ -1.02
MARK3-210ENST00000556463 C8orf82Q6P1X6 216 aaPredicted RBP8.67□□□□□ -1.02
MARK3-210ENST00000556463 ZPBP2Q6X784 338 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 GPR180Q86V85 440 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 OSTM1Q86WC4 334 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 UNC5BQ8IZJ1 945 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 SIX6OS1Q8N1H7 587 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 SLCO4A1Q96BD0 722 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 C12orf43Q96C57 262 aaKnown RBP8.67□□□□□ -1.02
MARK3-210ENST00000556463 C17orf80Q9BSJ5 609 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 CNPY3Q9BT09 278 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 C11orf84Q9BUA3 381 aaPredicted RBP8.67□□□□□ -1.02
MARK3-210ENST00000556463 OSBPL11Q9BXB4 747 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.67□□□□□ -1.02
MARK3-210ENST00000556463 TEKT2Q9UIF3 430 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 CPSF3Q9UKF6 684 aaKnown RBP8.67□□□□□ -1.02
MARK3-210ENST00000556463 KIAA1257Q9ULG3 409 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 DLGAP1O14490 977 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 MDM4O15151 490 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 HMGCRP04035 888 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 APRTP07741 180 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 DBTP11182 482 aaKnown RBP8.67□□□□□ -1.02
MARK3-210ENST00000556463 TNFSF9P41273 254 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 PRKCEQ02156 737 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 GALNT2Q10471 571 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 IKBKEQ14164 716 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 CCDC58Q4VC31 144 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 CEP78Q5JTW2 689 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 CHST15Q7LFX5 561 aaPredicted RBP8.67□□□□□ -1.02
MARK3-210ENST00000556463 CYGBQ8WWM9 190 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 FIG4Q92562 907 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 KHSRPQ92945 711 aaKnown RBP eCLIP8.67□□□□□ -1.02
MARK3-210ENST00000556463 RMND5BQ96G75 393 aaPredicted RBP8.67□□□□□ -1.02
MARK3-210ENST00000556463 ZNF670Q9BS34 389 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 TARS2Q9BW92 718 aaKnown RBP8.67□□□□□ -1.02
MARK3-210ENST00000556463 NIFKQ9BYG3 293 aaKnown RBP8.67□□□□□ -1.02
MARK3-210ENST00000556463 MAN1C1Q9NR34 630 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 EPS15L1Q9UBC2 864 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 PTBP2Q9UKA9 531 aaKnown RBP8.67□□□□□ -1.02
MARK3-210ENST00000556463 TLL2Q9Y6L7 1015 aa8.67□□□□□ -1.02
MARK3-210ENST00000556463 IGKV6D-21A0A0A0MT36 114 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 SYCE1LA8MT33 242 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 C9IYK1 514 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 GRID2O43424 1007 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 MED7O43513 233 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 MSCO60682 206 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 BCL10O95999 233 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 PTPN1P18031 435 aaKnown RBP8.66□□□□□ -1.02
MARK3-210ENST00000556463 CDH6P55285 790 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 FLOT2Q14254 428 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 TARBP2Q15633 366 aaKnown RBP8.66□□□□□ -1.02
MARK3-210ENST00000556463 BNC2Q6ZN30 1099 aaPredicted RBP8.66□□□□□ -1.02
MARK3-210ENST00000556463 TTC39CQ8N584 583 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 DEPDC1BQ8WUY9 529 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms