RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 CNTN5O94779 1100 aa14.19□□□□□ -0.14
ACTN1-219ENST00000556432 HSP90AA1P07900 732 aaKnown RBP14.19□□□□□ -0.14
ACTN1-219ENST00000556432 TSHRP16473 764 aa14.19□□□□□ -0.14
ACTN1-219ENST00000556432 L1CAMP32004 1257 aa14.19□□□□□ -0.14
ACTN1-219ENST00000556432 RPL34P49207 117 aaKnown RBP14.19□□□□□ -0.14
ACTN1-219ENST00000556432 NDUFA8P51970 172 aa14.19□□□□□ -0.14
ACTN1-219ENST00000556432 CCL7P80098 99 aa14.19□□□□□ -0.14
ACTN1-219ENST00000556432 CETN1Q12798 172 aa14.19□□□□□ -0.14
ACTN1-219ENST00000556432 MTA1Q13330 715 aa14.19□□□□□ -0.14
ACTN1-219ENST00000556432 TFAP2DQ7Z6R9 452 aa14.19□□□□□ -0.14
ACTN1-219ENST00000556432 VPS36Q86VN1 386 aa14.19□□□□□ -0.14
ACTN1-219ENST00000556432 ZSCAN30Q86W11 494 aa14.19□□□□□ -0.14
ACTN1-219ENST00000556432 ZFAND4Q86XD8 727 aa14.19□□□□□ -0.14
ACTN1-219ENST00000556432 DEFB106AQ8N104 65 aa14.19□□□□□ -0.14
ACTN1-219ENST00000556432 ARL10Q8N8L6 244 aa14.19□□□□□ -0.14
ACTN1-219ENST00000556432 DCAF4L2Q8NA75 395 aa14.19□□□□□ -0.14
ACTN1-219ENST00000556432 TMEM74Q96NL1 305 aa14.19□□□□□ -0.14
ACTN1-219ENST00000556432 LENG8Q96PV6 779 aaPredicted RBP14.19□□□□□ -0.14
ACTN1-219ENST00000556432 KLF6Q99612 283 aaPredicted RBP14.19□□□□□ -0.14
ACTN1-219ENST00000556432 HEPHQ9BQS7 1158 aa14.19□□□□□ -0.14
ACTN1-219ENST00000556432 SPON2Q9BUD6 331 aa14.19□□□□□ -0.14
ACTN1-219ENST00000556432 SLC4A5Q9BY07 1137 aa14.19□□□□□ -0.14
ACTN1-219ENST00000556432 ZDHHC6Q9H6R6 413 aa14.19□□□□□ -0.14
ACTN1-219ENST00000556432 GEMIN8Q9NWZ8 242 aaKnown RBP14.19□□□□□ -0.14
ACTN1-219ENST00000556432 ACSL6Q9UKU0 697 aa14.19□□□□□ -0.14
ACTN1-219ENST00000556432 HPSEQ9Y251 543 aa14.19□□□□□ -0.14
ACTN1-219ENST00000556432 WASF2Q9Y6W5 498 aa14.19□□□□□ -0.14
ACTN1-219ENST00000556432 PRAMEF33A0A0G2JMD5 474 aa14.18□□□□□ -0.14
ACTN1-219ENST00000556432 NVLO15381 856 aaKnown RBP14.18□□□□□ -0.14
ACTN1-219ENST00000556432 MED7O43513 233 aa14.18□□□□□ -0.14
ACTN1-219ENST00000556432 AP1G1O43747 822 aa14.18□□□□□ -0.14
ACTN1-219ENST00000556432 PRAMEF10O60809 474 aa14.18□□□□□ -0.14
ACTN1-219ENST00000556432 LETM1O95202 739 aaPredicted RBP14.18□□□□□ -0.14
ACTN1-219ENST00000556432 ITIH1P19827 911 aa14.18□□□□□ -0.14
ACTN1-219ENST00000556432 MAPK10P53779 464 aa14.18□□□□□ -0.14
ACTN1-219ENST00000556432 PFN3P60673 137 aa14.18□□□□□ -0.14
ACTN1-219ENST00000556432 FKBP3Q00688 224 aaKnown RBP14.18□□□□□ -0.14
ACTN1-219ENST00000556432 PPARDQ03181 441 aa14.18□□□□□ -0.14
ACTN1-219ENST00000556432 CLCA4Q14CN2 919 aa14.18□□□□□ -0.14
ACTN1-219ENST00000556432 SKIDA1Q1XH10 827 aa14.18□□□□□ -0.14
ACTN1-219ENST00000556432 PARS2Q7L3T8 475 aaKnown RBP14.18□□□□□ -0.14
ACTN1-219ENST00000556432 RYBPQ8N488 228 aaPredicted RBP14.18□□□□□ -0.14
ACTN1-219ENST00000556432 DENND6BQ8NEG7 585 aa14.18□□□□□ -0.14
ACTN1-219ENST00000556432 PCDH19Q8TAB3 1148 aa14.18□□□□□ -0.14
ACTN1-219ENST00000556432 STK32AQ8WU08 396 aa14.18□□□□□ -0.14
ACTN1-219ENST00000556432 C1QTNF2Q9BXJ5 285 aa14.18□□□□□ -0.14
ACTN1-219ENST00000556432 CLPBQ9H078 707 aa14.18□□□□□ -0.14
ACTN1-219ENST00000556432 METTL14Q9HCE5 456 aaKnown RBP14.18□□□□□ -0.14
ACTN1-219ENST00000556432 RABGEF1Q9UJ41 708 aa14.18□□□□□ -0.14
ACTN1-219ENST00000556432 GPR34Q9UPC5 381 aa14.18□□□□□ -0.14
ACTN1-219ENST00000556432 ITM2BQ9Y287 266 aa14.18□□□□□ -0.14
ACTN1-219ENST00000556432 A0A0D9SEW6 157 aa14.17□□□□□ -0.14
ACTN1-219ENST00000556432 THAP12O43422 761 aa14.17□□□□□ -0.14
ACTN1-219ENST00000556432 TSPAN6O43657 245 aa14.17□□□□□ -0.14
ACTN1-219ENST00000556432 CELA2BP08218 269 aaPredicted RBP14.17□□□□□ -0.14
ACTN1-219ENST00000556432 CTSEP14091 401 aa14.17□□□□□ -0.14
ACTN1-219ENST00000556432 CCNHP51946 323 aaPredicted RBP14.17□□□□□ -0.14
ACTN1-219ENST00000556432 PDCLQ13371 301 aa14.17□□□□□ -0.14
ACTN1-219ENST00000556432 EIF4EBP2Q13542 120 aaPredicted RBP14.17□□□□□ -0.14
ACTN1-219ENST00000556432 ELOCQ15369 112 aa14.17□□□□□ -0.14
ACTN1-219ENST00000556432 C4orf17Q53FE4 359 aa14.17□□□□□ -0.14
ACTN1-219ENST00000556432 ALFQ53S48 1182 aa14.17□□□□□ -0.14
ACTN1-219ENST00000556432 RETSATQ6NUM9 610 aa14.17□□□□□ -0.14
ACTN1-219ENST00000556432 KRBA2Q6ZNG9 492 aa14.17□□□□□ -0.14
ACTN1-219ENST00000556432 TMEM110Q86TL2 294 aa14.17□□□□□ -0.14
ACTN1-219ENST00000556432 ARHGEF19Q8IW93 802 aa14.17□□□□□ -0.14
ACTN1-219ENST00000556432 Q8N9G6 341 aaPredicted RBP14.17□□□□□ -0.14
ACTN1-219ENST00000556432 OR7D4Q8NG98 312 aa14.17□□□□□ -0.14
ACTN1-219ENST00000556432 ZNF564Q8TBZ8 553 aaPredicted RBP14.17□□□□□ -0.14
ACTN1-219ENST00000556432 HTR3CQ8WXA8 447 aa14.17□□□□□ -0.14
ACTN1-219ENST00000556432 SPATA32Q96LK8 384 aa14.17□□□□□ -0.14
ACTN1-219ENST00000556432 SLC2A13Q96QE2 648 aa14.17□□□□□ -0.14
ACTN1-219ENST00000556432 EPN3Q9H201 632 aa14.17□□□□□ -0.14
ACTN1-219ENST00000556432 FOXJ2Q9P0K8 574 aa14.17□□□□□ -0.14
ACTN1-219ENST00000556432 GGT7Q9UJ14 662 aa14.17□□□□□ -0.14
ACTN1-219ENST00000556432 PAXBP1Q9Y5B6 917 aa14.17□□□□□ -0.14
ACTN1-219ENST00000556432 UNC79Q9P2D8 2635 aa14.17□□□□□ -0.14
ACTN1-219ENST00000556432 USP9YO00507 2555 aaPredicted RBP14.17□□□□□ -0.14
ACTN1-219ENST00000556432 HSF2BPO75031 334 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 ALPIP09923 528 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 WT1P19544 449 aaPredicted RBP14.16□□□□□ -0.14
ACTN1-219ENST00000556432 CR2P20023 1033 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 OR1E1P30953 314 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 CCKBRP32239 447 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 IGFALSP35858 605 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 ABL2P42684 1182 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 PRCPP42785 496 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 SERPINH1P50454 418 aaKnown RBP14.16□□□□□ -0.14
ACTN1-219ENST00000556432 BLKP51451 505 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 GCNT1Q02742 428 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 IGFBP7Q16270 282 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 CCDC40Q4G0X9 1142 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 CARD16Q5EG05 197 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 ANKRD40Q6AI12 368 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 LRRC31Q6UY01 552 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 MACC1Q6ZN28 852 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 RD3Q7Z3Z2 195 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 SETD3Q86TU7 594 aaPredicted RBP14.16□□□□□ -0.14
ACTN1-219ENST00000556432 HID1Q8IV36 788 aa14.16□□□□□ -0.14
ACTN1-219ENST00000556432 FSTL5Q8N475 847 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms