RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 FCF1Q9Y324 198 aaKnown RBP9.35□□□□□ -0.91
ACTN1-218ENST00000556343 PIAS3Q9Y6X2 628 aa9.35□□□□□ -0.91
ACTN1-218ENST00000556343 HELZP42694 1942 aaKnown RBP9.35□□□□□ -0.91
ACTN1-218ENST00000556343 CCDC151A5D8V7 595 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 OTOL1A6NHN0 477 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-218ENST00000556343 BHMG1C9JSJ3 638 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-218ENST00000556343 PMPCBO75439 489 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 SUN1O94901 812 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 EPOP01588 193 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 SRCP12931 536 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 IVDP26440 423 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 CTHP32929 405 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 CD86P42081 329 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 NPY2RP49146 381 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 MAXP61244 160 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 VSNL1P62760 191 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 TFF2Q03403 129 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 PRKCQQ04759 706 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 BCL2L1Q07817 233 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 KCNJ11Q14654 390 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 GAB4Q2WGN9 574 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 MYLK3Q32MK0 819 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 SLC44A4Q53GD3 710 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 CFAP58Q5T655 872 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 FAXCQ5TGI0 409 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 ARMC3Q5W041 872 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 DSG4Q86SJ6 1040 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 C12orf40Q86WS4 652 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 ZCCHC9Q8N567 271 aaKnown RBP9.34□□□□□ -0.91
ACTN1-218ENST00000556343 TAB3Q8N5C8 712 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-218ENST00000556343 PDCD7Q8N8D1 485 aaKnown RBP9.34□□□□□ -0.91
ACTN1-218ENST00000556343 DNAAF3Q8N9W5 541 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 TSEN2Q8NCE0 465 aaKnown RBP9.34□□□□□ -0.91
ACTN1-218ENST00000556343 OR2AP1Q8NGE2 309 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 CYB5D2Q8WUJ1 264 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 LRIG1Q96JA1 1093 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 RPL10LQ96L21 214 aaKnown RBP9.34□□□□□ -0.91
ACTN1-218ENST00000556343 TUBGCP5Q96RT8 1024 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 SRPK1Q96SB4 655 aaKnown RBP9.34□□□□□ -0.91
ACTN1-218ENST00000556343 TBL1YQ9BQ87 522 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 PHACTR1Q9C0D0 580 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 EPC1Q9H2F5 836 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 ATP13A3Q9H7F0 1226 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 BFARQ9NZS9 450 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 HECAQ9UBI9 543 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-218ENST00000556343 NFU1Q9UMS0 254 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 DUSP12Q9UNI6 340 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 SORCS3Q9UPU3 1222 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 STARD13Q9Y3M8 1113 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 BRWD1Q9NSI6 2320 aa9.34□□□□□ -0.91
ACTN1-218ENST00000556343 DOCK4Q8N1I0 1966 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 NUP205Q92621 2012 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 EDDM13A0A1B0GTR0 161 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 MAGEB16A2A368 324 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 DYNC1I1O14576 645 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 SYNCRIPO60506 623 aaKnown RBP9.33□□□□□ -0.92
ACTN1-218ENST00000556343 CD160O95971 181 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 MT-CO1P00395 513 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 ASGR2P07307 311 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 HNRNPLP14866 589 aaKnown RBP eCLIP9.33□□□□□ -0.92
ACTN1-218ENST00000556343 SERPINA4P29622 427 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 CTSOP43234 321 aaPredicted RBP9.33□□□□□ -0.92
ACTN1-218ENST00000556343 NUMBP49757 651 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 EPHB1P54762 984 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 NRLP54845 237 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 WNT3AP56704 352 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 POLR2LP62875 67 aaKnown RBP9.33□□□□□ -0.92
ACTN1-218ENST00000556343 DSC2Q02487 901 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 CDK18Q07002 472 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 CCDC15Q0P6D6 951 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 CDH17Q12864 832 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 HIF1AQ16665 826 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 HSF5Q4G112 596 aaPredicted RBP9.33□□□□□ -0.92
ACTN1-218ENST00000556343 ALG1LQ6GMV1 187 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 C22orf39Q6P5X5 142 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 LRRC8BQ6P9F7 803 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 NCEH1Q6PIU2 408 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 SERPINA13PQ6UXR4 307 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 ZNF852Q6ZMS4 543 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 CCNJLQ8IV13 435 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 UBALD2Q8IYN6 164 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.33□□□□□ -0.92
ACTN1-218ENST00000556343 IPMKQ8NFU5 416 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 ARRDC2Q8TBH0 407 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 FBXO25Q8TCJ0 367 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 HNRNPLLQ8WVV9 542 aaKnown RBP9.33□□□□□ -0.92
ACTN1-218ENST00000556343 FAM3CQ92520 227 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 PRCCQ92733 491 aaPredicted RBP9.33□□□□□ -0.92
ACTN1-218ENST00000556343 LRRC39Q96DD0 335 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 FEM1CQ96JP0 617 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 ZNF641Q96N77 438 aaPredicted RBP9.33□□□□□ -0.92
ACTN1-218ENST00000556343 TTC25Q96NG3 672 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 RBM15Q96T37 977 aaKnown RBP eCLIP9.33□□□□□ -0.92
ACTN1-218ENST00000556343 NELL2Q99435 816 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 HEPHQ9BQS7 1158 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 NAT9Q9BTE0 207 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 OSBPL1AQ9BXW6 950 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 CPEB1Q9BZB8 566 aaKnown RBP9.33□□□□□ -0.92
ACTN1-218ENST00000556343 TM6SF2Q9BZW4 377 aa9.33□□□□□ -0.92
ACTN1-218ENST00000556343 ARFGAP3Q9NP61 516 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms