RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 KCNJ18B7U540 433 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 F8VP50 259 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 KCNK3O14649 394 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 PAPSS1O43252 624 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-239ENST00000556315 COCHO43405 550 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 SLC26A4O43511 780 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 HCRTO43612 131 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 CACNG3O60359 315 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 SYNCRIPO60506 623 aaKnown RBP5.08□□□□□ -1.6
ATXN3-239ENST00000556315 MAFKO60675 156 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 DNAJC8O75937 253 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-239ENST00000556315 RTN3O95197 1032 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-239ENST00000556315 RASGRP1O95267 797 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 LDHAP00338 332 aaKnown RBP5.08□□□□□ -1.6
ATXN3-239ENST00000556315 IGLV3-19P01714 112 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 NTRK1P04629 796 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 KRT18P05783 430 aaKnown RBP5.08□□□□□ -1.6
ATXN3-239ENST00000556315 KRT19P08727 400 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 PDGFRBP09619 1106 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 CISD3P0C7P0 127 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 ACADMP11310 421 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 C6P13671 934 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 TYRP14679 529 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 WARSP23381 471 aaKnown RBP5.08□□□□□ -1.6
ATXN3-239ENST00000556315 ADSSP30520 456 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 GNL1P36915 607 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-239ENST00000556315 IL12RB1P42701 662 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 TUBP50607 506 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 TOB1P50616 345 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-239ENST00000556315 CCT8P50990 548 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 UCNP55089 124 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 PSMC1P62191 440 aaKnown RBP5.08□□□□□ -1.6
ATXN3-239ENST00000556315 TLE3Q04726 772 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 SRSF1Q07955 248 aaKnown RBP eCLIP5.08□□□□□ -1.6
ATXN3-239ENST00000556315 C21orf62-AS1Q17RA5 79 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 CCDC142Q17RM4 750 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 FUT11Q495W5 492 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 LIPIQ6XZB0 460 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 UBE2R2Q712K3 238 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-239ENST00000556315 PCDH19Q8TAB3 1148 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 UCMAQ8WVF2 138 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 POMGNT1Q8WZA1 660 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 SEC14L1Q92503 715 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 PEX11GQ96HA9 241 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 PCED1BQ96HM7 432 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 HPDLQ96IR7 371 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 PLIN2Q99541 437 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 HNRNPABQ99729 332 aaKnown RBP5.08□□□□□ -1.6
ATXN3-239ENST00000556315 REEP2Q9BRK0 252 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 BBS2Q9BXC9 721 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 NACA2Q9H009 215 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 CDIP1Q9H305 208 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 ST6GALNAC4Q9H4F1 302 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 ZHX3Q9H4I2 956 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 COMMD8Q9NX08 183 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 THAP10Q9P2Z0 257 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-239ENST00000556315 PPARGC1AQ9UBK2 798 aaKnown RBP5.08□□□□□ -1.6
ATXN3-239ENST00000556315 FBXO10Q9UK96 956 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 CNOT11Q9UKZ1 510 aaKnown RBP5.08□□□□□ -1.6
ATXN3-239ENST00000556315 NBEAQ8NFP9 2946 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 ATG2BQ96BY7 2078 aa5.08□□□□□ -1.6
ATXN3-239ENST00000556315 PDCD11Q14690 1871 aaKnown RBP5.07□□□□□ -1.6
ATXN3-239ENST00000556315 A0A1B0GTQ1 180 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 TISP43B9A030 160 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 NEDD8-MDP1E9PL57 170 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 TIMM44O43615 452 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 SLC28A2O43868 658 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 TSPAN3O60637 253 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 LDOC1O95751 146 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-239ENST00000556315 ZDHHC11BP0C7U3 371 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 PTPN1P18031 435 aaKnown RBP5.07□□□□□ -1.6
ATXN3-239ENST00000556315 ACO1P21399 889 aaKnown RBP5.07□□□□□ -1.6
ATXN3-239ENST00000556315 CD27P26842 260 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 CSRP3P50461 194 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 ANAPC15P60006 121 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 PLP2Q04941 152 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 GOLGA8FQ08AF8 430 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 GOLGA8DPQ0D2H9 430 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 CCDC173Q0VFZ6 552 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 ILKQ13418 452 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 ENPP2Q13822 863 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 TBC1D25Q3MII6 688 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 TMEM119Q4V9L6 283 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 TM4SF20Q53R12 229 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 MDH1BQ5I0G3 518 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 RNF187Q5TA31 235 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-239ENST00000556315 HES3Q5TGS1 186 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 BROXQ5VW32 411 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 TPGS1Q6ZTW0 290 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 USP49Q70CQ1 688 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 ZNF720Q7Z2F6 126 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 GPBP1Q86WP2 473 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 FMNL3Q8IVF7 1028 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 BRSK2Q8IWQ3 736 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 LSMEM2Q8N112 164 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 AHI1Q8N157 1196 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 ZNF248Q8NDW4 579 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 KBTBD7Q8WVZ9 684 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 SNX19Q92543 992 aa5.07□□□□□ -1.6
ATXN3-239ENST00000556315 FBXO32Q969P5 355 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms