RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 ASB11Q8WXH4 323 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 FAM168AQ92567 244 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 TTC17Q96AE7 1141 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 TMA16Q96EY4 203 aaKnown RBP7.1□□□□□ -1.27
ATXN3-236ENST00000556220 APOLD1Q96LR9 279 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 CGRRF1Q99675 332 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 PNPLA8Q9NP80 782 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 OLFML3Q9NRN5 406 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 GEMIN8Q9NWZ8 242 aaKnown RBP7.1□□□□□ -1.27
ATXN3-236ENST00000556220 LIMCH1Q9UPQ0 1083 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 DMTF1Q9Y222 760 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 KIF3AQ9Y496 699 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 U3KQA8 63 aa7.1□□□□□ -1.27
ATXN3-236ENST00000556220 MYH10P35580 1976 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 SLC12A8A0AV02 714 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 TARSL2A2RTX5 802 aaKnown RBP7.09□□□□□ -1.27
ATXN3-236ENST00000556220 PMS2P1A4D2B8 440 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 NEMP2A6NFY4 417 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 SCAMP1O15126 338 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 FFAR2O15552 330 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 NOBOXO60393 691 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 PIAS2O75928 621 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 KRT38O76015 456 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 ALPPL2P10696 532 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 ITIH2P19823 946 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 ADORA2BP29275 332 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 CD70P32970 193 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 LONP1P36776 959 aaKnown RBP7.09□□□□□ -1.27
ATXN3-236ENST00000556220 AFMP43652 599 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 ZNF445P59923 1031 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 ST8SIA6P61647 398 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 PSMD6Q15008 389 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 TBR1Q16650 682 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 ALG1LQ6GMV1 187 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 RBM44Q6ZP01 1051 aaKnown RBP7.09□□□□□ -1.27
ATXN3-236ENST00000556220 UNC93AQ86WB7 457 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 AADATQ8N5Z0 425 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 KDM1BQ8NB78 822 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 WDR36Q8NI36 951 aaKnown RBP7.09□□□□□ -1.27
ATXN3-236ENST00000556220 JAKMIP2Q96AA8 810 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 CCDC127Q96BQ5 260 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 LIN37Q96GY3 246 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-236ENST00000556220 LMLNQ96KR4 655 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 FGFBP2Q9BYJ0 223 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 SDCBP2Q9H190 292 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 EPN3Q9H201 632 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 FAM49BQ9NUQ9 324 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 NLGN3Q9NZ94 848 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 MARCH2Q9P0N8 246 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 CYTH4Q9UIA0 394 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 STOML2Q9UJZ1 356 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 STRIP2Q9ULQ0 834 aa7.09□□□□□ -1.27
ATXN3-236ENST00000556220 CENPEQ02224 2701 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 FRMD3A2A2Y4 597 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 PRAMEF26H0Y7S4 382 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 K7ESM1 405 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 PAGE1O75459 146 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 TCEA3O75764 348 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 ITGA2BP08514 1039 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 IDEP14735 1019 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 C5AR1P21730 350 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 MAT2AP31153 395 aaKnown RBP7.08□□□□□ -1.28
ATXN3-236ENST00000556220 NDST1P52848 882 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 CYP24A1Q07973 514 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 SRSF6Q13247 344 aaKnown RBP7.08□□□□□ -1.28
ATXN3-236ENST00000556220 CLCA4Q14CN2 919 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 SNRNP35Q16560 246 aaKnown RBP7.08□□□□□ -1.28
ATXN3-236ENST00000556220 ZNF699Q32M78 642 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 ZNF667Q5HYK9 610 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 MPP7Q5T2T1 576 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 ADGRF1Q5T601 910 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 ZBTB37Q5TC79 503 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 HIST2H2BCQ6DN03 193 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-236ENST00000556220 SCARA5Q6ZMJ2 495 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 SV2BQ7L1I2 683 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 C14orf80Q86SX3 495 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 PTRH1Q86Y79 214 aaKnown RBP7.08□□□□□ -1.28
ATXN3-236ENST00000556220 ZNF564Q8TBZ8 553 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-236ENST00000556220 FAM131CQ96AQ9 280 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 ARRDC3Q96B67 414 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 CYFIP2Q96F07 1278 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 MRGPRX3Q96LB0 322 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 ACSL6Q9UKU0 697 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 SRPK3Q9UPE1 567 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 CA5BQ9Y2D0 317 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 PCDHGA7Q9Y5G6 932 aa7.08□□□□□ -1.28
ATXN3-236ENST00000556220 UTP20O75691 2785 aaKnown RBP7.08□□□□□ -1.28
ATXN3-236ENST00000556220 KIF26BQ2KJY2 2108 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 CCDC187A0A096LP49 1063 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-236ENST00000556220 EDDM13A0A1B0GTR0 161 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 CPED1A4D0V7 1026 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 EME2A4GXA9 379 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-236ENST00000556220 TTC34A8MYJ7 566 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 SLC7A4O43246 635 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 STX6O43752 255 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 LATS1O95835 1130 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 ASLP04424 464 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 P4HA1P13674 534 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms