RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 PEX11BO96011 259 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 VIMP08670 466 aaKnown RBP8.44□□□□□ -1.06
ATXN3-235ENST00000556082 DHRS4L1P0CG22 281 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 CSH1P0DML2 217 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 CSH2P0DML3 217 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 ALADP13716 330 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 HMGA1P17096 107 aaKnown RBP8.44□□□□□ -1.06
ATXN3-235ENST00000556082 LAG3P18627 525 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 NFKB1P19838 968 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 TAC1P20366 129 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 CA4P22748 312 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 MGAT1P26572 445 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 OR1D2P34982 312 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 RPA3P35244 121 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-235ENST00000556082 ATP5C1P36542 298 aaKnown RBP8.44□□□□□ -1.06
ATXN3-235ENST00000556082 CCNFP41002 786 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 MAPKAPK2P49137 400 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 PAPOLAP51003 745 aaKnown RBP8.44□□□□□ -1.06
ATXN3-235ENST00000556082 RENBPP51606 427 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 NEK3P51956 506 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 RAC1P63000 192 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 MGAT5Q09328 741 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 NIPAL4Q0D2K0 466 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 MTM1Q13496 603 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 BTG3Q14201 252 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-235ENST00000556082 PDK4Q16654 411 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 PARP15Q460N3 678 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 SYCP2LQ5T4T6 812 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 NAPEPLDQ6IQ20 393 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 FBXL22Q6P050 247 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 TRMT10BQ6PF06 316 aaKnown RBP8.44□□□□□ -1.06
ATXN3-235ENST00000556082 CTAGE3PQ8IX95 158 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 CACNA2D3Q8IZS8 1091 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 TEX26Q8N6G2 289 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 ANKS4BQ8N8V4 417 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 ANKRD42Q8N9B4 389 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 NETO2Q8NC67 525 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 CCDC197Q8NCU1 140 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 GPR152Q8TDT2 470 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 CDKL2Q92772 493 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 APOPT1Q96IL0 206 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 CELF6Q96J87 481 aaKnown RBP8.44□□□□□ -1.06
ATXN3-235ENST00000556082 AGAP3Q96P47 875 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 KIFC1Q9BW19 673 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 NOL6Q9H6R4 1146 aaKnown RBP8.44□□□□□ -1.06
ATXN3-235ENST00000556082 ARNT2Q9HBZ2 717 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 SMYD2Q9NRG4 433 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 SPG21Q9NZD8 308 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 IPO11Q9UI26 975 aaKnown RBP8.44□□□□□ -1.06
ATXN3-235ENST00000556082 NUDT5Q9UKK9 219 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 VANGL2Q9ULK5 521 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 SLC6A14Q9UN76 642 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 ATP11BQ9Y2G3 1177 aa8.44□□□□□ -1.06
ATXN3-235ENST00000556082 TANC1Q9C0D5 1861 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 VWA8A3KMH1 1905 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 GOLGA6L7A0A1B0GV03 622 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 HMX2A2RU54 273 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 TRIM49D1C9J1S8 452 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 SNX3O60493 162 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 TLR5O60602 858 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 SPAG7O75391 227 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 RFPL1O75677 317 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 SOAT2O75908 522 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 SEC24AO95486 1093 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 TBX18O95935 607 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 OAS1P00973 400 aaKnown RBP8.43□□□□□ -1.06
ATXN3-235ENST00000556082 IL1BP01584 269 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 FOXN2P32314 431 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 ADRA1AP35348 466 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 PPM1AP35813 382 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 PBX3P40426 434 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 ETV4P43268 484 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 GEMP55040 296 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 SESN2P58004 480 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-235ENST00000556082 CREMQ03060 361 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 IL10RBQ08334 325 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 CDH17Q12864 832 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 MPP3Q13368 585 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 CRYMQ14894 314 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 LRRC14Q15048 493 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 SLC1A5Q15758 541 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 ANKRD20A4Q4UJ75 823 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 CRTC2Q53ET0 693 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-235ENST00000556082 NKAPLQ5M9Q1 402 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 HECTD3Q5T447 861 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 HHATQ5VTY9 493 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 RANBP10Q6VN20 620 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 CHSY1Q86X52 802 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 TCEAL8Q8IYN2 117 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 C4orf33Q8N1A6 199 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 STKLD1Q8NE28 680 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 OR52K1Q8NGK4 314 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 MGARPQ8TDB4 240 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 TCP10LQ8TDR4 215 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 GIPC2Q8TF65 315 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 DEPDC1BQ8WUY9 529 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 TADA1Q96BN2 335 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 PLD4Q96BZ4 506 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 TMEM169Q96HH4 297 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 SERAC1Q96JX3 654 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms