RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 TM6SF2Q9BZW4 377 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 ZDHHC6Q9H6R6 413 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 FBRSQ9HAH7 460 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 XAB2Q9HCS7 855 aaKnown RBP11.36□□□□□ -0.59
SHMT2-220ENST00000555634 DYRK4Q9NR20 520 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.36□□□□□ -0.59
SHMT2-220ENST00000555634 FAM153AQ9UHL3 310 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 INTS6Q9UL03 887 aaKnown RBP11.36□□□□□ -0.59
SHMT2-220ENST00000555634 ATP8A1Q9Y2Q0 1164 aa11.36□□□□□ -0.59
SHMT2-220ENST00000555634 FCF1Q9Y324 198 aaKnown RBP11.36□□□□□ -0.59
SHMT2-220ENST00000555634 V9GYY5 206 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-220ENST00000555634 C1QTNF3-AMACRE9PGA6 284 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 INSIG1O15503 277 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 NARSO43776 548 aaKnown RBP11.35□□□□□ -0.59
SHMT2-220ENST00000555634 ATP9BO43861 1147 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 PRNPP04156 253 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 ZSCAN5DPP0CG00 497 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 TPSB2P20231 275 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 TNFRSF8P28908 595 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 CD86P42081 329 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 RPL21P46778 160 aaKnown RBP11.35□□□□□ -0.59
SHMT2-220ENST00000555634 SLC6A11P48066 632 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 TERF1P54274 439 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 EPHB1P54762 984 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 DRG2P55039 364 aaKnown RBP11.35□□□□□ -0.59
SHMT2-220ENST00000555634 ARL4CP56559 192 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 MAXP61244 160 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 BCL2L1Q07817 233 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 TPSAB1Q15661 275 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 DLG2Q15700 870 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 ELF2Q15723 593 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 PCSK7Q16549 785 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 ERCC6LQ2NKX8 1250 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 GAB4Q2WGN9 574 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 SLC44A4Q53GD3 710 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 DNAJC21Q5F1R6 531 aaKnown RBP11.35□□□□□ -0.59
SHMT2-220ENST00000555634 DGKKQ5KSL6 1271 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 ALG1LQ6GMV1 187 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 ASTLQ6HA08 431 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-220ENST00000555634 PDIK1LQ8N165 341 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 TAB3Q8N5C8 712 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-220ENST00000555634 DNAAF3Q8N9W5 541 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 TSEN2Q8NCE0 465 aaKnown RBP11.35□□□□□ -0.59
SHMT2-220ENST00000555634 IPMKQ8NFU5 416 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 CHFRQ96EP1 664 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 IMP4Q96G21 291 aaKnown RBP11.35□□□□□ -0.59
SHMT2-220ENST00000555634 LRIG1Q96JA1 1093 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 EXOC2Q96KP1 924 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 LMLNQ96KR4 655 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 FMO2Q99518 471 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 SAMD15Q9P1V8 674 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 WNT16Q9UBV4 365 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 SUN2Q9UH99 717 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 CA14Q9ULX7 337 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 SNX24Q9Y343 169 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 ARIH1Q9Y4X5 557 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-220ENST00000555634 MYLKQ15746 1914 aa11.35□□□□□ -0.59
SHMT2-220ENST00000555634 C19orf67A6NJJ6 358 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 STK25O00506 426 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 ALOX15BO15296 676 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 ATG13O75143 517 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 SOCS5O75159 536 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 PMPCBO75439 489 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 POP4O95707 220 aaKnown RBP11.34□□□□□ -0.59
SHMT2-220ENST00000555634 AP2A1O95782 977 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 PEX11BO96011 259 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 EPHX1P07099 455 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 ETS1P14921 441 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 XPAP23025 273 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-220ENST00000555634 CTSOP43234 321 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-220ENST00000555634 CSNK1DP48730 415 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 GALK1P51570 392 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 CCNHP51946 323 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-220ENST00000555634 ITGA8P53708 1063 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 SEC13P55735 322 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 MRPS21P82921 87 aaKnown RBP11.34□□□□□ -0.59
SHMT2-220ENST00000555634 DSC2Q02487 901 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 CCDC15Q0P6D6 951 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 SFSWAPQ12872 951 aaKnown RBP11.34□□□□□ -0.59
SHMT2-220ENST00000555634 LAMB3Q13751 1172 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 ELAVL3Q14576 367 aaKnown RBP11.34□□□□□ -0.59
SHMT2-220ENST00000555634 ZNF234Q14588 700 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 HIF1AQ16665 826 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 CARD16Q5EG05 197 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 TMEM196Q5HYL7 178 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 TJAP1Q5JTD0 557 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 EOGTQ5NDL2 527 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 FAXCQ5TGI0 409 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 DUPD1Q68J44 220 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 Q6ZVU0 165 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 CENPUQ71F23 418 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 SRLQ86TD4 932 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 RNF135Q8IUD6 432 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 PLPP6Q8IY26 295 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 PHTF2Q8N3S3 785 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 LRRN4CLQ8ND94 238 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 PDCD6IPQ8WUM4 868 aaKnown RBP11.34□□□□□ -0.59
SHMT2-220ENST00000555634 MYO19Q96H55 970 aa11.34□□□□□ -0.59
SHMT2-220ENST00000555634 RBM15Q96T37 977 aaKnown RBP eCLIP11.34□□□□□ -0.59
SHMT2-220ENST00000555634 NELL2Q99435 816 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms