RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 UBE3AQ05086 875 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 SPIRE1Q08AE8 756 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 KCNA10Q16322 511 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 KYNUQ16719 465 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 RGS21Q2M5E4 152 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 LSM12Q3MHD2 195 aaKnown RBP8.51□□□□□ -1.05
LINC00641-201ENST00000555379 WSCD1Q658N2 575 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 CDCA3Q99618 268 aaPredicted RBP8.51□□□□□ -1.05
LINC00641-201ENST00000555379 C8orf4Q9NR00 106 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 ADPRHL2Q9NX46 363 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 OR12D3Q9UGF7 316 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 ZNF232Q9UNY5 417 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 STMND1H3BQB6 276 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 RNF103O00237 685 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 DNM1LO00429 736 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 ITGAVP06756 1048 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 FGFR4P22455 802 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 SUOXP51687 545 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 CACNA2D1P54289 1103 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 DRG2P55039 364 aaKnown RBP8.51□□□□□ -1.05
LINC00641-201ENST00000555379 PTP4A2Q12974 167 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 MMRN1Q13201 1228 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 BOP1Q14137 746 aaKnown RBP8.51□□□□□ -1.05
LINC00641-201ENST00000555379 STXBP5Q5T5C0 1151 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 ARHGAP17Q68EM7 881 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 CYP20A1Q6UW02 462 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 BBS12Q6ZW61 710 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 DENND6AQ8IWF6 608 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 CENPLQ8N0S6 344 aaPredicted RBP8.51□□□□□ -1.05
LINC00641-201ENST00000555379 TTC29Q8NA56 475 aaPredicted RBP8.51□□□□□ -1.05
LINC00641-201ENST00000555379 ACTL9Q8TC94 416 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 DEPDC7Q96QD5 511 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 LRRC1Q9BTT6 524 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 CLEC4MQ9H2X3 399 aaPredicted RBP8.51□□□□□ -1.05
LINC00641-201ENST00000555379 RNPEPQ9H4A4 650 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 IARS2Q9NSE4 1012 aaKnown RBP8.51□□□□□ -1.05
LINC00641-201ENST00000555379 SPATA7Q9P0W8 599 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 A0A1B0GVM2 712 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 TCAF2A6NFQ2 919 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 SEMA3DO95025 777 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 ALOX5P09917 674 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 ERVK-21P61565 698 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 SMAD3P84022 425 aaKnown RBP8.51□□□□□ -1.05
LINC00641-201ENST00000555379 XKR4Q5GH76 650 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 EOGTQ5NDL2 527 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 RTL3Q8N8U3 475 aaKnown RBP8.51□□□□□ -1.05
LINC00641-201ENST00000555379 ZBTB8BQ8NAP8 495 aaPredicted RBP8.51□□□□□ -1.05
LINC00641-201ENST00000555379 KIAA0895Q8NCT3 520 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 ZSWIM2Q8NEG5 633 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 CCT8L2Q96SF2 557 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 HNRNPABQ99729 332 aaKnown RBP8.51□□□□□ -1.05
LINC00641-201ENST00000555379 BBS2Q9BXC9 721 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 DPY30Q9C005 99 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 KCTD10Q9H3F6 313 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 PLGRKTQ9HBL7 147 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 KCND1Q9NSA2 647 aa8.51□□□□□ -1.05
LINC00641-201ENST00000555379 CHORDC1Q9UHD1 332 aaPredicted RBP8.51□□□□□ -1.05
LINC00641-201ENST00000555379 ZSCAN9O15535 394 aaPredicted RBP8.5□□□□□ -1.05
LINC00641-201ENST00000555379 IDH3BO43837 385 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 TRIM13O60858 407 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 PGK1P00558 417 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 RB1P06400 928 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 AKT2P31751 481 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 RPA3P35244 121 aaPredicted RBP8.5□□□□□ -1.05
LINC00641-201ENST00000555379 RAB15P59190 212 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 CRY1Q16526 586 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 ANXA8L1Q5VT79 327 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 FUT10Q6P4F1 479 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 KIAA1324Q6UXG2 1013 aaKnown RBP8.5□□□□□ -1.05
LINC00641-201ENST00000555379 B3GNT6Q6ZMB0 384 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 DIS3LQ8TF46 1054 aaKnown RBP8.5□□□□□ -1.05
LINC00641-201ENST00000555379 TCF12Q99081 682 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 CCDC195A0A1B0GUA6 201 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 GNG14A0A1W2PPG7 69 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 SYNDIG1LA6NDD5 238 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 CCT8L1PA6NM43 557 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 TLR5O60602 858 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 FSBPO95073 299 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 ANXA6P08133 673 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 HNRNPA1P09651 372 aaKnown RBP eCLIP8.5□□□□□ -1.05
LINC00641-201ENST00000555379 KDELR1P24390 212 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 CASP4P49662 377 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 SPIDRQ14159 915 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 SMTNL2Q2TAL5 461 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 KDM7AQ6ZMT4 941 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 PHYKPLQ8IUZ5 450 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 ZCCHC9Q8N567 271 aaKnown RBP8.5□□□□□ -1.05
LINC00641-201ENST00000555379 SETD9Q8NE22 299 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 SEC16BQ96JE7 1060 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 MOV10Q9HCE1 1003 aaKnown RBP8.5□□□□□ -1.05
LINC00641-201ENST00000555379 HCN3Q9P1Z3 774 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 TRPS1Q9UHF7 1281 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 SAC3D1A6NKF1 404 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 FKBP6O75344 327 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 TCF3P15923 654 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 CYP51A1Q16850 503 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 SCAIQ8N9R8 606 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 HHIPL1Q96JK4 782 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 BBS4Q96RK4 519 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 UGT2B28Q9BY64 529 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms