RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 ARF5P84085 180 aa13.36□□□□□ -0.27
XRCC3-212ENST00000555231 DEUP1Q05D60 604 aa13.36□□□□□ -0.27
XRCC3-212ENST00000555231 SGCGQ13326 291 aa13.36□□□□□ -0.27
XRCC3-212ENST00000555231 NR0B2Q15466 257 aa13.36□□□□□ -0.27
XRCC3-212ENST00000555231 CARD16Q5EG05 197 aa13.36□□□□□ -0.27
XRCC3-212ENST00000555231 BRMS1LQ5PSV4 323 aa13.36□□□□□ -0.27
XRCC3-212ENST00000555231 INO80CQ6PI98 192 aaPredicted RBP13.36□□□□□ -0.27
XRCC3-212ENST00000555231 TRIM65Q6PJ69 517 aa13.36□□□□□ -0.27
XRCC3-212ENST00000555231 LRRC31Q6UY01 552 aa13.36□□□□□ -0.27
XRCC3-212ENST00000555231 CCDC81Q6ZN84 652 aa13.36□□□□□ -0.27
XRCC3-212ENST00000555231 ZNF397Q8NF99 534 aaPredicted RBP13.36□□□□□ -0.27
XRCC3-212ENST00000555231 OR6K2Q8NGY2 324 aa13.36□□□□□ -0.27
XRCC3-212ENST00000555231 MED8Q96G25 268 aa13.36□□□□□ -0.27
XRCC3-212ENST00000555231 TBCBQ99426 244 aa13.36□□□□□ -0.27
XRCC3-212ENST00000555231 TM6SF2Q9BZW4 377 aa13.36□□□□□ -0.27
XRCC3-212ENST00000555231 CLMPQ9H6B4 373 aa13.36□□□□□ -0.27
XRCC3-212ENST00000555231 ATP13A1Q9HD20 1204 aa13.36□□□□□ -0.27
XRCC3-212ENST00000555231 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.36□□□□□ -0.27
XRCC3-212ENST00000555231 ITM2BQ9Y287 266 aa13.36□□□□□ -0.27
XRCC3-212ENST00000555231 CDRT15L2A8MXV6 281 aa13.35□□□□□ -0.27
XRCC3-212ENST00000555231 GCATO75600 419 aa13.35□□□□□ -0.27
XRCC3-212ENST00000555231 ZMPSTE24O75844 475 aa13.35□□□□□ -0.27
XRCC3-212ENST00000555231 PNMA6AP0CW24 399 aaPredicted RBP13.35□□□□□ -0.27
XRCC3-212ENST00000555231 ADKP55263 362 aaKnown RBP13.35□□□□□ -0.27
XRCC3-212ENST00000555231 PAK1Q13153 545 aa13.35□□□□□ -0.27
XRCC3-212ENST00000555231 CLN3Q13286 438 aa13.35□□□□□ -0.27
XRCC3-212ENST00000555231 MORC3Q14149 939 aa13.35□□□□□ -0.27
XRCC3-212ENST00000555231 ARTNQ5T4W7 220 aa13.35□□□□□ -0.27
XRCC3-212ENST00000555231 RETSATQ6NUM9 610 aa13.35□□□□□ -0.27
XRCC3-212ENST00000555231 FOXR2Q6PJQ5 311 aa13.35□□□□□ -0.27
XRCC3-212ENST00000555231 SLC35F3Q8IY50 421 aa13.35□□□□□ -0.27
XRCC3-212ENST00000555231 DRC7Q8IY82 874 aa13.35□□□□□ -0.27
XRCC3-212ENST00000555231 RYBPQ8N488 228 aaPredicted RBP13.35□□□□□ -0.27
XRCC3-212ENST00000555231 PCDH20Q8N6Y1 951 aaKnown RBP13.35□□□□□ -0.27
XRCC3-212ENST00000555231 WDR36Q8NI36 951 aaKnown RBP13.35□□□□□ -0.27
XRCC3-212ENST00000555231 SHC3Q92529 594 aa13.35□□□□□ -0.27
XRCC3-212ENST00000555231 CCDC97Q96F63 343 aaPredicted RBP13.35□□□□□ -0.27
XRCC3-212ENST00000555231 C1QTNF2Q9BXJ5 285 aa13.35□□□□□ -0.27
XRCC3-212ENST00000555231 HECAQ9UBI9 543 aaPredicted RBP13.35□□□□□ -0.27
XRCC3-212ENST00000555231 SPASTQ9UBP0 616 aa13.35□□□□□ -0.27
XRCC3-212ENST00000555231 APEX2Q9UBZ4 518 aa13.35□□□□□ -0.27
XRCC3-212ENST00000555231 APOBEC3BQ9UH17 382 aaKnown RBP13.35□□□□□ -0.27
XRCC3-212ENST00000555231 PNMA8BQ9ULN7 279 aaPredicted RBP13.35□□□□□ -0.27
XRCC3-212ENST00000555231 STAP1Q9ULZ2 295 aa13.35□□□□□ -0.27
XRCC3-212ENST00000555231 PCDHGA8Q9Y5G5 932 aa13.35□□□□□ -0.27
XRCC3-212ENST00000555231 IGLV3-10A0A075B6K4 115 aa13.34□□□□□ -0.27
XRCC3-212ENST00000555231 ILVBLA1L0T0 632 aa13.34□□□□□ -0.27
XRCC3-212ENST00000555231 C16orf96A6NNT2 1141 aa13.34□□□□□ -0.27
XRCC3-212ENST00000555231 NEMP1O14524 444 aa13.34□□□□□ -0.27
XRCC3-212ENST00000555231 TPP1O14773 563 aa13.34□□□□□ -0.27
XRCC3-212ENST00000555231 AP1G1O43747 822 aa13.34□□□□□ -0.27
XRCC3-212ENST00000555231 KRT9P35527 623 aa13.34□□□□□ -0.27
XRCC3-212ENST00000555231 PDX1P52945 283 aa13.34□□□□□ -0.27
XRCC3-212ENST00000555231 PFN3P60673 137 aa13.34□□□□□ -0.27
XRCC3-212ENST00000555231 KCNC4Q03721 635 aa13.34□□□□□ -0.27
XRCC3-212ENST00000555231 PTK2Q05397 1052 aa13.34□□□□□ -0.27
XRCC3-212ENST00000555231 C1QBPQ07021 282 aaKnown RBP13.34□□□□□ -0.27
XRCC3-212ENST00000555231 PRRT3Q5FWE3 981 aa13.34□□□□□ -0.27
XRCC3-212ENST00000555231 PRICKLE2Q7Z3G6 844 aa13.34□□□□□ -0.27
XRCC3-212ENST00000555231 SLC47A2Q86VL8 602 aa13.34□□□□□ -0.27
XRCC3-212ENST00000555231 PHACTR4Q8IZ21 702 aa13.34□□□□□ -0.27
XRCC3-212ENST00000555231 ARL14Q8N4G2 192 aa13.34□□□□□ -0.27
XRCC3-212ENST00000555231 TPCN2Q8NHX9 752 aa13.34□□□□□ -0.27
XRCC3-212ENST00000555231 GRAMD1AQ96CP6 724 aa13.34□□□□□ -0.27
XRCC3-212ENST00000555231 LENG8Q96PV6 779 aaPredicted RBP13.34□□□□□ -0.27
XRCC3-212ENST00000555231 CCDC3Q9BQI4 270 aa13.34□□□□□ -0.27
XRCC3-212ENST00000555231 LRRC61Q9BV99 259 aa13.34□□□□□ -0.27
XRCC3-212ENST00000555231 BOCQ9BWV1 1114 aa13.34□□□□□ -0.27
XRCC3-212ENST00000555231 CEP44Q9C0F1 390 aa13.34□□□□□ -0.27
XRCC3-212ENST00000555231 RRN3Q9NYV6 651 aa13.34□□□□□ -0.27
XRCC3-212ENST00000555231 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.34□□□□□ -0.27
XRCC3-212ENST00000555231 NCKIPSDQ9NZQ3 722 aa13.34□□□□□ -0.27
XRCC3-212ENST00000555231 ZNF212Q9UDV6 495 aa13.34□□□□□ -0.27
XRCC3-212ENST00000555231 PIEZO2Q9H5I5 2752 aa13.33□□□□□ -0.27
XRCC3-212ENST00000555231 CHD5Q8TDI0 1954 aa13.33□□□□□ -0.28
XRCC3-212ENST00000555231 CCDC187A0A096LP49 1063 aa13.33□□□□□ -0.28
XRCC3-212ENST00000555231 TSPAN6O43657 245 aa13.33□□□□□ -0.28
XRCC3-212ENST00000555231 TCEA3O75764 348 aa13.33□□□□□ -0.28
XRCC3-212ENST00000555231 WISP1O95388 367 aa13.33□□□□□ -0.28
XRCC3-212ENST00000555231 CD160O95971 181 aa13.33□□□□□ -0.28
XRCC3-212ENST00000555231 ANXA6P08133 673 aa13.33□□□□□ -0.28
XRCC3-212ENST00000555231 CELA2BP08218 269 aaPredicted RBP13.33□□□□□ -0.28
XRCC3-212ENST00000555231 CLCN1P35523 988 aa13.33□□□□□ -0.28
XRCC3-212ENST00000555231 IGFALSP35858 605 aa13.33□□□□□ -0.28
XRCC3-212ENST00000555231 ACVRL1P37023 503 aa13.33□□□□□ -0.28
XRCC3-212ENST00000555231 RPIAP49247 311 aa13.33□□□□□ -0.28
XRCC3-212ENST00000555231 THOP1P52888 689 aa13.33□□□□□ -0.28
XRCC3-212ENST00000555231 SNX16P57768 344 aa13.33□□□□□ -0.28
XRCC3-212ENST00000555231 GNA12Q03113 381 aa13.33□□□□□ -0.28
XRCC3-212ENST00000555231 SLC20A2Q08357 652 aa13.33□□□□□ -0.28
XRCC3-212ENST00000555231 SPIDRQ14159 915 aa13.33□□□□□ -0.28
XRCC3-212ENST00000555231 TCEA2Q15560 299 aa13.33□□□□□ -0.28
XRCC3-212ENST00000555231 C2CD6Q53TS8 623 aa13.33□□□□□ -0.28
XRCC3-212ENST00000555231 LRRC73Q5JTD7 316 aa13.33□□□□□ -0.28
XRCC3-212ENST00000555231 C6orf132Q5T0Z8 1188 aa13.33□□□□□ -0.28
XRCC3-212ENST00000555231 FAM102AQ5T9C2 384 aaPredicted RBP13.33□□□□□ -0.28
XRCC3-212ENST00000555231 LEKR1Q6ZMV7 388 aa13.33□□□□□ -0.28
XRCC3-212ENST00000555231 GBP6Q6ZN66 633 aa13.33□□□□□ -0.28
XRCC3-212ENST00000555231 CLEC14AQ86T13 490 aa13.33□□□□□ -0.28
XRCC3-212ENST00000555231 VPS36Q86VN1 386 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms