RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 UNC5AQ6ZN44 842 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 MPP5Q8N3R9 675 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 NTAN1Q96AB6 310 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 ALKBH8Q96BT7 664 aaKnown RBP16.78■□□□□ 0.28
PCNX1-209ENST00000554879 BTN2A3PQ96KV6 586 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 COMMD3-BMI1R4GMX3 469 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 C5orf60A6NFR6 353 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 MAGEB3O15480 346 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 COL6A1P12109 1028 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 XPAP23025 273 aaPredicted RBP16.78■□□□□ 0.28
PCNX1-209ENST00000554879 MMP13P45452 471 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 AP2B1P63010 937 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 DSG1Q02413 1049 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 MGAT5Q09328 741 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 RBM23Q86U06 439 aaKnown RBP16.78■□□□□ 0.28
PCNX1-209ENST00000554879 SGF29Q96ES7 293 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 TRIM55Q9BYV6 548 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 SLC39A8Q9C0K1 460 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 GCATO75600 419 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 SERPINB8P50452 374 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 DCTN2Q13561 401 aaKnown RBP16.78■□□□□ 0.28
PCNX1-209ENST00000554879 SKA2Q8WVK7 121 aaPredicted RBP16.78■□□□□ 0.28
PCNX1-209ENST00000554879 ELMO2Q96JJ3 720 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 VAT1Q99536 393 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 USP29Q9HBJ7 922 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 B4GALT3O60512 393 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 ABHD2P08910 425 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 LAG3P18627 525 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 ZNF135P52742 658 aaPredicted RBP16.78■□□□□ 0.28
PCNX1-209ENST00000554879 FASTKD1Q53R41 847 aaKnown RBP16.78■□□□□ 0.28
PCNX1-209ENST00000554879 ATG16L1Q676U5 607 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 CCSAPQ6IQ19 270 aaPredicted RBP16.78■□□□□ 0.28
PCNX1-209ENST00000554879 TRMT10BQ6PF06 316 aaKnown RBP16.78■□□□□ 0.28
PCNX1-209ENST00000554879 PTAR1Q7Z6K3 402 aaPredicted RBP16.78■□□□□ 0.28
PCNX1-209ENST00000554879 ITIH5Q86UX2 942 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 KIAA2013Q8IYS2 634 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 TMA16Q96EY4 203 aaKnown RBP16.78■□□□□ 0.28
PCNX1-209ENST00000554879 ZNF184Q99676 751 aaPredicted RBP16.78■□□□□ 0.28
PCNX1-209ENST00000554879 THTPAQ9BU02 230 aa16.78■□□□□ 0.28
PCNX1-209ENST00000554879 FGBP02675 491 aa16.77■□□□□ 0.28
PCNX1-209ENST00000554879 CYP11A1P05108 521 aa16.77■□□□□ 0.28
PCNX1-209ENST00000554879 F7P08709 466 aaPredicted RBP16.77■□□□□ 0.28
PCNX1-209ENST00000554879 TPBGLP0DKB5 382 aa16.77■□□□□ 0.28
PCNX1-209ENST00000554879 ZNF24P17028 368 aa16.77■□□□□ 0.28
PCNX1-209ENST00000554879 GLRBP48167 497 aa16.77■□□□□ 0.28
PCNX1-209ENST00000554879 SLC34A1Q06495 639 aa16.77■□□□□ 0.28
PCNX1-209ENST00000554879 LIN52Q52LA3 116 aa16.77■□□□□ 0.28
PCNX1-209ENST00000554879 FAM171BQ6P995 826 aa16.77■□□□□ 0.28
PCNX1-209ENST00000554879 TMEM173Q86WV6 379 aaPredicted RBP16.77■□□□□ 0.28
PCNX1-209ENST00000554879 UNC5BQ8IZJ1 945 aa16.77■□□□□ 0.28
PCNX1-209ENST00000554879 THEGQ9P2T0 379 aa16.77■□□□□ 0.28
PCNX1-209ENST00000554879 SLC12A4Q9UP95 1085 aa16.77■□□□□ 0.28
PCNX1-209ENST00000554879 CRCPO75575 148 aa16.77■□□□□ 0.28
PCNX1-209ENST00000554879 UNC5CO95185 931 aa16.77■□□□□ 0.28
PCNX1-209ENST00000554879 ITGA2BP08514 1039 aa16.77■□□□□ 0.28
PCNX1-209ENST00000554879 PGAM1P18669 254 aa16.77■□□□□ 0.28
PCNX1-209ENST00000554879 TRIP10Q15642 601 aa16.77■□□□□ 0.28
PCNX1-209ENST00000554879 TAS2R42Q7RTR8 314 aa16.77■□□□□ 0.28
PCNX1-209ENST00000554879 C14orf80Q86SX3 495 aa16.77■□□□□ 0.28
PCNX1-209ENST00000554879 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.77■□□□□ 0.28
PCNX1-209ENST00000554879 LZICQ8WZA0 190 aa16.77■□□□□ 0.28
PCNX1-209ENST00000554879 TBL1YQ9BQ87 522 aa16.77■□□□□ 0.28
PCNX1-209ENST00000554879 RTP3Q9BQQ7 232 aa16.77■□□□□ 0.28
PCNX1-209ENST00000554879 KRT75O95678 551 aa16.77■□□□□ 0.27
PCNX1-209ENST00000554879 CDK16Q00536 496 aa16.77■□□□□ 0.27
PCNX1-209ENST00000554879 CRLF3Q8IUI8 442 aa16.77■□□□□ 0.27
PCNX1-209ENST00000554879 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.77■□□□□ 0.27
PCNX1-209ENST00000554879 C7orf61Q8IZ16 206 aa16.77■□□□□ 0.27
PCNX1-209ENST00000554879 LINC01599Q8WXQ3 324 aa16.77■□□□□ 0.27
PCNX1-209ENST00000554879 SEZ6LQ9BYH1 1024 aa16.77■□□□□ 0.27
PCNX1-209ENST00000554879 EURLQ9NYK6 297 aa16.77■□□□□ 0.27
PCNX1-209ENST00000554879 HS3ST4Q9Y661 456 aa16.77■□□□□ 0.27
PCNX1-209ENST00000554879 TTC24A2A3L6 582 aaPredicted RBP16.76■□□□□ 0.27
PCNX1-209ENST00000554879 MAP3K13O43283 966 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 GJA1P17302 382 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 CORO1AP31146 461 aaKnown RBP16.76■□□□□ 0.27
PCNX1-209ENST00000554879 RHBDF2Q6PJF5 856 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 ARHGAP36Q6ZRI8 547 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 KCNMB4Q86W47 210 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 TSSK1BQ9BXA7 367 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 Q9H521 79 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 TASP1Q9H6P5 420 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 CERS4Q9HA82 394 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 TRIP11Q15643 1979 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 OAZ2O95190 189 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 ZWINTO95229 277 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 RECQLP46063 649 aaPredicted RBP16.76■□□□□ 0.27
PCNX1-209ENST00000554879 TRIM71Q2Q1W2 868 aaKnown RBP16.76■□□□□ 0.27
PCNX1-209ENST00000554879 MARK2Q7KZI7 788 aaKnown RBP16.76■□□□□ 0.27
PCNX1-209ENST00000554879 IGDCC3Q8IVU1 814 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 LRRC39Q96DD0 335 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 IGSF21Q96ID5 467 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 PPP1R36Q96LQ0 422 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 CDK5RAP1Q96SZ6 601 aaKnown RBP16.76■□□□□ 0.27
PCNX1-209ENST00000554879 SEMA3CQ99985 751 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 SELENONQ9NZV5 590 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 PPARGC1AQ9UBK2 798 aaKnown RBP16.76■□□□□ 0.27
PCNX1-209ENST00000554879 ARID2Q68CP9 1835 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 HSPA4LO95757 839 aa16.76■□□□□ 0.27
PCNX1-209ENST00000554879 FAM26DQ5JW98 314 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms