RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 GOLGA8JA6NMD2 632 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 CBX4O00257 560 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 KIAA0391O15091 583 aaKnown RBP5.04□□□□□ -1.6
ATXN3-229ENST00000554672 KLK10O43240 276 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 PRPF6O94906 941 aaKnown RBP5.04□□□□□ -1.6
ATXN3-229ENST00000554672 MT-CO3P00414 261 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 PENKP01210 267 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-229ENST00000554672 CKMT2P17540 419 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 GAP43P17677 238 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 PRKCHP24723 683 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 MC3RP41968 323 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 PI4KAP42356 2102 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 RXRGP48443 463 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 LSSP48449 732 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 ARRB1P49407 418 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-229ENST00000554672 SLC5A3P53794 718 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 SLURP1P55000 103 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 ERVPABLB-1P60509 514 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 RPS14P62263 151 aaKnown RBP5.04□□□□□ -1.6
ATXN3-229ENST00000554672 ARID5AQ03989 594 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 GRIN1Q05586 938 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 ST3GAL1Q11201 340 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 SHBQ15464 509 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 GEN1Q17RS7 908 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 WDR72Q3MJ13 1102 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 L1TD1Q5T7N2 865 aaKnown RBP5.04□□□□□ -1.6
ATXN3-229ENST00000554672 LAYNQ6UX15 382 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 SERPINA13PQ6UXR4 307 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 PAQR9Q6ZVX9 377 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 TRAPPC11Q7Z392 1133 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 ANKS1BQ7Z6G8 1248 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 SYCP3Q8IZU3 236 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 GPD1LQ8N335 351 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 B3GALNT2Q8NCR0 500 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 OR5B17Q8NGF7 314 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 RASSF8Q8NHQ8 419 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 NOC3LQ8WTT2 800 aaKnown RBP5.04□□□□□ -1.6
ATXN3-229ENST00000554672 KCNE4Q8WWG9 221 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 LARP4BQ92615 738 aaKnown RBP5.04□□□□□ -1.6
ATXN3-229ENST00000554672 GOLGA1Q92805 767 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 NAF1Q96HR8 494 aaKnown RBP5.04□□□□□ -1.6
ATXN3-229ENST00000554672 PIWIL1Q96J94 861 aaKnown RBP5.04□□□□□ -1.6
ATXN3-229ENST00000554672 ORAI3Q9BRQ5 295 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 MED10Q9BTT4 135 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 SLC2A11Q9BYW1 496 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 DCLK3Q9C098 648 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 CIPCQ9C0C6 399 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 IKZF4Q9H2S9 585 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 DPEP3Q9H4B8 488 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 ERVMER34-1Q9H9K5 563 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 CPNE5Q9HCH3 593 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 KIAA1586Q9HCI6 787 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 DMAP1Q9NPF5 467 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-229ENST00000554672 GDF3Q9NR23 364 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 WHRNQ9P202 907 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 SEL1LQ9UBV2 794 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 SUN2Q9UH99 717 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 PLA2G4CQ9UP65 541 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 LIMCH1Q9UPQ0 1083 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 NCKAP1Q9Y2A7 1128 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 NME7Q9Y5B8 376 aa5.04□□□□□ -1.6
ATXN3-229ENST00000554672 HEMK1Q9Y5R4 338 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-229ENST00000554672 TLR4O00206 839 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 PRICKLE3O43900 615 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-229ENST00000554672 GCNT3O95395 438 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 KLKB1P03952 638 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 DNTTP04053 509 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 IGHV4-34P06331 123 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 RARGP13631 454 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 VAMP1P23763 118 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 ACP1P24666 158 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 CD38P28907 300 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 EPHA8P29322 1005 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-229ENST00000554672 ATICP31939 592 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 PGFP49763 221 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 TNNC1P63316 161 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 COG7P83436 770 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 NFKB2Q00653 900 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 TRPC3Q13507 836 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 ALCAMQ13740 583 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 DPY19L1Q2PZI1 675 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 TTC31Q49AM3 519 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-229ENST00000554672 SLC45A4Q5BKX6 768 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 KIAA0895LQ68EN5 471 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 USP30Q70CQ3 517 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 TADA2BQ86TJ2 420 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 SFR1Q86XK3 245 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 CACUL1Q86Y37 369 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 WDR49Q8IV35 697 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 ARHGEF39Q8N4T4 335 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 ZNF276Q8N554 614 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 C19orf47Q8N9M1 422 aaKnown RBP5.03□□□□□ -1.6
ATXN3-229ENST00000554672 SMARCD1Q96GM5 515 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 TNIP3Q96KP6 325 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 CBWD1Q9BRT8 395 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 TMEM245Q9H330 911 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 PCIF1Q9H4Z3 704 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 CSNK1G1Q9HCP0 422 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 SCML1Q9UN30 329 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 SCML2Q9UQR0 700 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms