RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 ERCC2P18074 760 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 CSRP1P21291 193 aaKnown RBP10.84□□□□□ -0.67
SHMT2-213ENST00000554600 IL1R2P27930 398 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 CD38P28907 300 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 HNRNPH3P31942 346 aaKnown RBP10.84□□□□□ -0.67
SHMT2-213ENST00000554600 GKP32189 559 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 PCK1P35558 622 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 NEK3P51956 506 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 NDST2P52849 883 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 BNC1Q01954 994 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 KRT81Q14533 505 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 SLC18A3Q16572 532 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 KIF19Q2TAC6 998 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 SETMARQ53H47 684 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-213ENST00000554600 BOLA3Q53S33 107 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 ZFYVE27Q5T4F4 411 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 PIP5KL1Q5T9C9 394 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 H2AFVQ71UI9 128 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 PSTKQ8IV42 348 aaKnown RBP10.84□□□□□ -0.67
SHMT2-213ENST00000554600 CNGA4Q8IV77 575 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 OR2AP1Q8NGE2 309 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 SETD7Q8WTS6 366 aaKnown RBP10.84□□□□□ -0.67
SHMT2-213ENST00000554600 CASKIN2Q8WXE0 1202 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 EXOC2Q96KP1 924 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 CCDC42Q96M95 316 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 PACSIN1Q9BY11 444 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 EBF2Q9HAK2 575 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 SP110Q9HB58 689 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 IL21RQ9HBE5 538 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 PREBQ9HCU5 417 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 OSGEPQ9NPF4 335 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 DNAAF2Q9NVR5 837 aaKnown RBP10.84□□□□□ -0.67
SHMT2-213ENST00000554600 CWC15Q9P013 229 aaKnown RBP10.84□□□□□ -0.67
SHMT2-213ENST00000554600 TPX2Q9ULW0 747 aaKnown RBP10.84□□□□□ -0.67
SHMT2-213ENST00000554600 PCDHB9Q9Y5E1 797 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 MAP1BP46821 2468 aaKnown RBP10.84□□□□□ -0.67
SHMT2-213ENST00000554600 KNTC1P50748 2209 aa10.84□□□□□ -0.67
SHMT2-213ENST00000554600 A0A1W2PQU0 124 aa10.83□□□□□ -0.68
SHMT2-213ENST00000554600 C16orf96A6NNT2 1141 aa10.83□□□□□ -0.68
SHMT2-213ENST00000554600 AKR1B15C9JRZ8 316 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-213ENST00000554600 RNF103O00237 685 aa10.83□□□□□ -0.68
SHMT2-213ENST00000554600 NEMP1O14524 444 aa10.83□□□□□ -0.68
SHMT2-213ENST00000554600 SLC31A1O15431 190 aa10.83□□□□□ -0.68
SHMT2-213ENST00000554600 RARAP10276 462 aa10.83□□□□□ -0.68
SHMT2-213ENST00000554600 ADRB3P13945 408 aa10.83□□□□□ -0.68
SHMT2-213ENST00000554600 PRLRP16471 622 aa10.83□□□□□ -0.68
SHMT2-213ENST00000554600 AMPD1P23109 780 aa10.83□□□□□ -0.68
SHMT2-213ENST00000554600 ITGB7P26010 798 aa10.83□□□□□ -0.68
SHMT2-213ENST00000554600 PAPOLAP51003 745 aaKnown RBP10.83□□□□□ -0.68
SHMT2-213ENST00000554600 ZNF135P52742 658 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-213ENST00000554600 TAS2R38P59533 333 aa10.83□□□□□ -0.68
SHMT2-213ENST00000554600 MAPK8IP2Q13387 824 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-213ENST00000554600 STAT4Q14765 748 aa10.83□□□□□ -0.68
SHMT2-213ENST00000554600 HADHQ16836 314 aaKnown RBP10.83□□□□□ -0.68
SHMT2-213ENST00000554600 MYLK3Q32MK0 819 aa10.83□□□□□ -0.68
SHMT2-213ENST00000554600 N4BP2L1Q5TBK1 243 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-213ENST00000554600 TXNRD3NBQ6F5E7 133 aa10.83□□□□□ -0.68
SHMT2-213ENST00000554600 NAPEPLDQ6IQ20 393 aa10.83□□□□□ -0.68
SHMT2-213ENST00000554600 CYP4V2Q6ZWL3 525 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-213ENST00000554600 TRIM69Q86WT6 500 aa10.83□□□□□ -0.68
SHMT2-213ENST00000554600 KLHL32Q96NJ5 620 aa10.83□□□□□ -0.68
SHMT2-213ENST00000554600 CHP1Q99653 195 aa10.83□□□□□ -0.68
SHMT2-213ENST00000554600 ORAI3Q9BRQ5 295 aa10.83□□□□□ -0.68
SHMT2-213ENST00000554600 HDAC8Q9BY41 377 aa10.83□□□□□ -0.68
SHMT2-213ENST00000554600 SLC39A8Q9C0K1 460 aa10.83□□□□□ -0.68
SHMT2-213ENST00000554600 NHEJ1Q9H9Q4 299 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-213ENST00000554600 TM7SF3Q9NS93 570 aa10.83□□□□□ -0.68
SHMT2-213ENST00000554600 SPTLC3Q9NUV7 552 aa10.83□□□□□ -0.68
SHMT2-213ENST00000554600 FNDC3AQ9Y2H6 1198 aaKnown RBP10.83□□□□□ -0.68
SHMT2-213ENST00000554600 PTPRBP23467 1997 aa10.83□□□□□ -0.68
SHMT2-213ENST00000554600 CXorf51AA0A1B0GTR3 108 aa10.82□□□□□ -0.68
SHMT2-213ENST00000554600 SPAARA0A1B0GVQ0 90 aa10.82□□□□□ -0.68
SHMT2-213ENST00000554600 SSU72P8A0A1W2PR75 194 aa10.82□□□□□ -0.68
SHMT2-213ENST00000554600 J3KR12 359 aa10.82□□□□□ -0.68
SHMT2-213ENST00000554600 WNT9AO14904 365 aa10.82□□□□□ -0.68
SHMT2-213ENST00000554600 LATO43561 262 aa10.82□□□□□ -0.68
SHMT2-213ENST00000554600 SH3BP5O60239 455 aa10.82□□□□□ -0.68
SHMT2-213ENST00000554600 PRAMEF11O60813 436 aa10.82□□□□□ -0.68
SHMT2-213ENST00000554600 PALMO75781 387 aa10.82□□□□□ -0.68
SHMT2-213ENST00000554600 WNT1P04628 370 aa10.82□□□□□ -0.68
SHMT2-213ENST00000554600 ADRB1P08588 477 aa10.82□□□□□ -0.68
SHMT2-213ENST00000554600 CEACAM1P13688 526 aa10.82□□□□□ -0.68
SHMT2-213ENST00000554600 CD59P13987 128 aa10.82□□□□□ -0.68
SHMT2-213ENST00000554600 XPAP23025 273 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-213ENST00000554600 NUDT1P36639 197 aa10.82□□□□□ -0.68
SHMT2-213ENST00000554600 HCAR3P49019 387 aa10.82□□□□□ -0.68
SHMT2-213ENST00000554600 CDH6P55285 790 aa10.82□□□□□ -0.68
SHMT2-213ENST00000554600 SIM1P81133 766 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-213ENST00000554600 IL9RQ01113 521 aa10.82□□□□□ -0.68
SHMT2-213ENST00000554600 SLC14A1Q13336 389 aa10.82□□□□□ -0.68
SHMT2-213ENST00000554600 DPYSL2Q16555 572 aa10.82□□□□□ -0.68
SHMT2-213ENST00000554600 INO80DQ53TQ3 878 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-213ENST00000554600 ZNF805Q5CZA5 627 aa10.82□□□□□ -0.68
SHMT2-213ENST00000554600 LRRC73Q5JTD7 316 aa10.82□□□□□ -0.68
SHMT2-213ENST00000554600 PRAMEF14Q5SWL7 426 aa10.82□□□□□ -0.68
SHMT2-213ENST00000554600 CFAP58Q5T655 872 aa10.82□□□□□ -0.68
SHMT2-213ENST00000554600 SARM1Q6SZW1 724 aa10.82□□□□□ -0.68
SHMT2-213ENST00000554600 TMCO3Q6UWJ1 677 aa10.82□□□□□ -0.68
SHMT2-213ENST00000554600 GDPD4Q6W3E5 623 aa10.82□□□□□ -0.68
SHMT2-213ENST00000554600 PARS2Q7L3T8 475 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms