RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 LCMT1Q9UIC8 334 aa14.34□□□□□ -0.11
SPTLC2-202ENST00000554365 COL5A1P20908 1838 aaPredicted RBP14.34□□□□□ -0.11
SPTLC2-202ENST00000554365 TP53BP1Q12888 1972 aaPredicted RBP14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 CABIN1Q9Y6J0 2220 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 URB1O60287 2271 aaKnown RBP14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 TBC1D3DA0A087WVF3 549 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 TBC1D3IA0A087WXS9 549 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 TBC1D3EA0A087X179 549 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 TBC1D3KA0A087X1G2 549 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 TBC1D3FA6NER0 549 aaPredicted RBP14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 TBC1D3LB9A6J9 549 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 CAPN9O14815 690 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 YKT6O15498 198 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 APOEP02649 317 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 C1SP09871 688 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 TBC1D3HP0C7X1 549 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 C5AR1P21730 350 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 NNMTP40261 264 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 SLC1A1P43005 524 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 ACADVLP49748 655 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 STK19P49842 368 aaPredicted RBP14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 ADPRHP54922 357 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 GNG11P61952 73 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 ETF1P62495 437 aaKnown RBP14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 SLC25A11Q02978 314 aaKnown RBP14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 BNIP3Q12983 259 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 TARDBPQ13148 414 aaKnown RBP eCLIP14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 CDO1Q16878 200 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 HES3Q5TGS1 186 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 MEI1Q5TIA1 1274 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 RAP1GAP2Q684P5 730 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 TBC1D3GQ6DHY5 549 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 TBC1D3CQ6IPX1 549 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 LRRC69Q6ZNQ3 347 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 STRADAQ7RTN6 431 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 CHSY1Q86X52 802 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 TBC1D3Q8IZP1 549 aaPredicted RBP14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 FAM172AQ8WUF8 416 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 PTPRN2Q92932 1015 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 PEBP4Q96S96 227 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 TLR10Q9BXR5 811 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 PIGVQ9NUD9 493 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 RRN3Q9NYV6 651 aa14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 XPO7Q9UIA9 1087 aaKnown RBP14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 GOLGA4Q13439 2230 aaKnown RBP14.33□□□□□ -0.12
SPTLC2-202ENST00000554365 M0QYT0 321 aa14.32□□□□□ -0.12
SPTLC2-202ENST00000554365 TLR4O00206 839 aa14.32□□□□□ -0.12
SPTLC2-202ENST00000554365 DDX3YO15523 660 aaKnown RBP14.32□□□□□ -0.12
SPTLC2-202ENST00000554365 TRUB2O95900 331 aaKnown RBP14.32□□□□□ -0.12
SPTLC2-202ENST00000554365 CDK4P11802 303 aa14.32□□□□□ -0.12
SPTLC2-202ENST00000554365 IL1R2P27930 398 aa14.32□□□□□ -0.12
SPTLC2-202ENST00000554365 MZF1P28698 734 aaPredicted RBP14.32□□□□□ -0.12
SPTLC2-202ENST00000554365 MIPP30301 263 aa14.32□□□□□ -0.12
SPTLC2-202ENST00000554365 PCK1P35558 622 aa14.32□□□□□ -0.12
SPTLC2-202ENST00000554365 MARCKSL1P49006 195 aa14.32□□□□□ -0.12
SPTLC2-202ENST00000554365 NXPH1P58417 271 aa14.32□□□□□ -0.12
SPTLC2-202ENST00000554365 PPP2CBP62714 309 aa14.32□□□□□ -0.12
SPTLC2-202ENST00000554365 PPP2CAP67775 309 aa14.32□□□□□ -0.12
SPTLC2-202ENST00000554365 NNTQ13423 1086 aa14.32□□□□□ -0.12
SPTLC2-202ENST00000554365 TXNRD3NBQ6F5E7 133 aa14.32□□□□□ -0.12
SPTLC2-202ENST00000554365 SYCE1Q8N0S2 351 aa14.32□□□□□ -0.12
SPTLC2-202ENST00000554365 KRT35Q92764 455 aa14.32□□□□□ -0.12
SPTLC2-202ENST00000554365 SLC39A13Q96H72 371 aa14.32□□□□□ -0.12
SPTLC2-202ENST00000554365 HES6Q96HZ4 224 aa14.32□□□□□ -0.12
SPTLC2-202ENST00000554365 ALS2CR12Q96Q35 445 aa14.32□□□□□ -0.12
SPTLC2-202ENST00000554365 UBL7Q96S82 380 aaPredicted RBP14.32□□□□□ -0.12
SPTLC2-202ENST00000554365 STAP1Q9ULZ2 295 aa14.32□□□□□ -0.12
SPTLC2-202ENST00000554365 PACSIN2Q9UNF0 486 aaPredicted RBP14.32□□□□□ -0.12
SPTLC2-202ENST00000554365 I6L893 689 aaPredicted RBP14.31□□□□□ -0.12
SPTLC2-202ENST00000554365 TLX3O43711 291 aaPredicted RBP14.31□□□□□ -0.12
SPTLC2-202ENST00000554365 ZIC2O95409 532 aaPredicted RBP14.31□□□□□ -0.12
SPTLC2-202ENST00000554365 PRB1P04280 392 aa14.31□□□□□ -0.12
SPTLC2-202ENST00000554365 ATP1A1P05023 1023 aaKnown RBP14.31□□□□□ -0.12
SPTLC2-202ENST00000554365 VAV1P15498 845 aa14.31□□□□□ -0.12
SPTLC2-202ENST00000554365 TACR2P21452 398 aa14.31□□□□□ -0.12
SPTLC2-202ENST00000554365 CTNNA2P26232 953 aa14.31□□□□□ -0.12
SPTLC2-202ENST00000554365 MAT2AP31153 395 aaKnown RBP14.31□□□□□ -0.12
SPTLC2-202ENST00000554365 DRD3P35462 400 aa14.31□□□□□ -0.12
SPTLC2-202ENST00000554365 EIF2S3P41091 472 aaKnown RBP14.31□□□□□ -0.12
SPTLC2-202ENST00000554365 ELAVL3Q14576 367 aaKnown RBP14.31□□□□□ -0.12
SPTLC2-202ENST00000554365 ZC3H12AQ5D1E8 599 aaKnown RBP14.31□□□□□ -0.12
SPTLC2-202ENST00000554365 NAPEPLDQ6IQ20 393 aa14.31□□□□□ -0.12
SPTLC2-202ENST00000554365 FBXL19Q6PCT2 694 aa14.31□□□□□ -0.12
SPTLC2-202ENST00000554365 SYT10Q6XYQ8 523 aa14.31□□□□□ -0.12
SPTLC2-202ENST00000554365 PEX26Q7Z412 305 aa14.31□□□□□ -0.12
SPTLC2-202ENST00000554365 PRPF39Q86UA1 669 aaKnown RBP14.31□□□□□ -0.12
SPTLC2-202ENST00000554365 CIR1Q86X95 450 aaPredicted RBP14.31□□□□□ -0.12
SPTLC2-202ENST00000554365 OXR1Q8N573 874 aa14.31□□□□□ -0.12
SPTLC2-202ENST00000554365 TSC1Q92574 1164 aa14.31□□□□□ -0.12
SPTLC2-202ENST00000554365 ANLNQ9NQW6 1124 aa14.31□□□□□ -0.12
SPTLC2-202ENST00000554365 DDIT4Q9NX09 232 aa14.31□□□□□ -0.12
SPTLC2-202ENST00000554365 AMFRQ9UKV5 643 aa14.31□□□□□ -0.12
SPTLC2-202ENST00000554365 TPX2Q9ULW0 747 aaKnown RBP14.31□□□□□ -0.12
SPTLC2-202ENST00000554365 GCN1Q92616 2671 aaKnown RBP14.3□□□□□ -0.12
SPTLC2-202ENST00000554365 C10orf142B7Z368 130 aa14.3□□□□□ -0.12
SPTLC2-202ENST00000554365 F5H5T6 163 aa14.3□□□□□ -0.12
SPTLC2-202ENST00000554365 RRP8O43159 456 aaKnown RBP14.3□□□□□ -0.12
SPTLC2-202ENST00000554365 SPOPO43791 374 aa14.3□□□□□ -0.12
SPTLC2-202ENST00000554365 CTNNA1P35221 906 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms