RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 STIM2Q9P246 746 aa17.29■□□□□ 0.36
NEK9-204ENST00000554258 APEX2Q9UBZ4 518 aa17.29■□□□□ 0.36
NEK9-204ENST00000554258 USP3Q9Y6I4 520 aa17.29■□□□□ 0.36
NEK9-204ENST00000554258 A0A1W2PQU0 124 aa17.28■□□□□ 0.36
NEK9-204ENST00000554258 TRIM21P19474 475 aaKnown RBP17.28■□□□□ 0.36
NEK9-204ENST00000554258 SLC6A4P31645 630 aa17.28■□□□□ 0.36
NEK9-204ENST00000554258 CCKBRP32239 447 aa17.28■□□□□ 0.36
NEK9-204ENST00000554258 KLK7P49862 253 aa17.28■□□□□ 0.36
NEK9-204ENST00000554258 APBA1Q02410 837 aa17.28■□□□□ 0.36
NEK9-204ENST00000554258 INCA1Q0VD86 236 aa17.28■□□□□ 0.36
NEK9-204ENST00000554258 LRMPQ12912 555 aa17.28■□□□□ 0.36
NEK9-204ENST00000554258 FAM46CQ5VWP2 391 aa17.28■□□□□ 0.36
NEK9-204ENST00000554258 RFWD3Q6PCD5 774 aa17.28■□□□□ 0.36
NEK9-204ENST00000554258 GCNT7Q6ZNI0 430 aa17.28■□□□□ 0.36
NEK9-204ENST00000554258 ENOSF1Q7L5Y1 443 aa17.28■□□□□ 0.36
NEK9-204ENST00000554258 ABI3BPQ7Z7G0 1075 aa17.28■□□□□ 0.36
NEK9-204ENST00000554258 PARGQ86W56 976 aa17.28■□□□□ 0.36
NEK9-204ENST00000554258 TTC39CQ8N584 583 aa17.28■□□□□ 0.36
NEK9-204ENST00000554258 EFCAB3Q8N7B9 438 aa17.28■□□□□ 0.36
NEK9-204ENST00000554258 SPAG5Q96R06 1193 aa17.28■□□□□ 0.36
NEK9-204ENST00000554258 CNTN6Q9UQ52 1028 aa17.28■□□□□ 0.36
NEK9-204ENST00000554258 SVILO95425 2214 aa17.27■□□□□ 0.36
NEK9-204ENST00000554258 A6NNZ2 444 aa17.27■□□□□ 0.36
NEK9-204ENST00000554258 CLDN1O95832 211 aa17.27■□□□□ 0.36
NEK9-204ENST00000554258 LATS1O95835 1130 aa17.27■□□□□ 0.36
NEK9-204ENST00000554258 NOS2P35228 1153 aa17.27■□□□□ 0.36
NEK9-204ENST00000554258 ETV5P41161 510 aa17.27■□□□□ 0.36
NEK9-204ENST00000554258 ATP1A2P50993 1020 aa17.27■□□□□ 0.36
NEK9-204ENST00000554258 MAPK10P53779 464 aa17.27■□□□□ 0.36
NEK9-204ENST00000554258 YWHAGP61981 247 aaKnown RBP eCLIP17.27■□□□□ 0.36
NEK9-204ENST00000554258 ECT2LQ008S8 904 aa17.27■□□□□ 0.36
NEK9-204ENST00000554258 FZD2Q14332 565 aa17.27■□□□□ 0.36
NEK9-204ENST00000554258 FIGNQ5HY92 759 aa17.27■□□□□ 0.36
NEK9-204ENST00000554258 PIK3R6Q5UE93 754 aa17.27■□□□□ 0.36
NEK9-204ENST00000554258 TEX19Q8NA77 164 aa17.27■□□□□ 0.36
NEK9-204ENST00000554258 FIBINQ8TAL6 211 aa17.27■□□□□ 0.36
NEK9-204ENST00000554258 KAT5Q92993 513 aa17.27■□□□□ 0.36
NEK9-204ENST00000554258 CYFIP2Q96F07 1278 aa17.27■□□□□ 0.36
NEK9-204ENST00000554258 RPL10LQ96L21 214 aaKnown RBP17.27■□□□□ 0.36
NEK9-204ENST00000554258 UBE2TQ9NPD8 197 aaPredicted RBP17.27■□□□□ 0.36
NEK9-204ENST00000554258 PADI4Q9UM07 663 aa17.27■□□□□ 0.36
NEK9-204ENST00000554258 HBS1LQ9Y450 684 aaKnown RBP17.27■□□□□ 0.36
NEK9-204ENST00000554258 WIPF3A6NGB9 483 aa17.26■□□□□ 0.35
NEK9-204ENST00000554258 C9orf172C9J069 976 aa17.26■□□□□ 0.35
NEK9-204ENST00000554258 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.26■□□□□ 0.35
NEK9-204ENST00000554258 EPHB6O15197 1021 aa17.26■□□□□ 0.35
NEK9-204ENST00000554258 TPM3P06753 285 aa17.26■□□□□ 0.35
NEK9-204ENST00000554258 UCHL3P15374 230 aa17.26■□□□□ 0.35
NEK9-204ENST00000554258 VAV1P15498 845 aa17.26■□□□□ 0.35
NEK9-204ENST00000554258 JUNDP17535 347 aa17.26■□□□□ 0.35
NEK9-204ENST00000554258 ZNF284Q2VY69 593 aa17.26■□□□□ 0.35
NEK9-204ENST00000554258 PITRM1Q5JRX3 1037 aa17.26■□□□□ 0.35
NEK9-204ENST00000554258 GJB7Q6PEY0 223 aa17.26■□□□□ 0.35
NEK9-204ENST00000554258 RRAGAQ7L523 313 aa17.26■□□□□ 0.35
NEK9-204ENST00000554258 UNC93AQ86WB7 457 aa17.26■□□□□ 0.35
NEK9-204ENST00000554258 PPM1KQ8N3J5 372 aa17.26■□□□□ 0.35
NEK9-204ENST00000554258 FAM174AQ8TBP5 190 aa17.26■□□□□ 0.35
NEK9-204ENST00000554258 SHC3Q92529 594 aa17.26■□□□□ 0.35
NEK9-204ENST00000554258 EDEM3Q9BZQ6 932 aa17.26■□□□□ 0.35
NEK9-204ENST00000554258 TTYH3Q9C0H2 523 aa17.26■□□□□ 0.35
NEK9-204ENST00000554258 CISHQ9NSE2 258 aa17.26■□□□□ 0.35
NEK9-204ENST00000554258 DKK3Q9UBP4 350 aa17.26■□□□□ 0.35
NEK9-204ENST00000554258 IPO11Q9UI26 975 aaKnown RBP17.26■□□□□ 0.35
NEK9-204ENST00000554258 DNAJC12Q9UKB3 198 aa17.26■□□□□ 0.35
NEK9-204ENST00000554258 AJAP1Q9UKB5 411 aaPredicted RBP17.26■□□□□ 0.35
NEK9-204ENST00000554258 SARDHQ9UL12 918 aa17.26■□□□□ 0.35
NEK9-204ENST00000554258 SPG11Q96JI7 2443 aa17.26■□□□□ 0.35
NEK9-204ENST00000554258 SPTY2D1-AS1A0A0U1RR47 76 aa17.25■□□□□ 0.35
NEK9-204ENST00000554258 STMND1H3BQB6 276 aa17.25■□□□□ 0.35
NEK9-204ENST00000554258 MOCS3O95396 460 aa17.25■□□□□ 0.35
NEK9-204ENST00000554258 NNMTP40261 264 aa17.25■□□□□ 0.35
NEK9-204ENST00000554258 ZNF75DP51815 510 aa17.25■□□□□ 0.35
NEK9-204ENST00000554258 TAS2R38P59533 333 aa17.25■□□□□ 0.35
NEK9-204ENST00000554258 CDH18Q13634 790 aa17.25■□□□□ 0.35
NEK9-204ENST00000554258 FGL2Q14314 439 aa17.25■□□□□ 0.35
NEK9-204ENST00000554258 TMEM164Q5U3C3 297 aa17.25■□□□□ 0.35
NEK9-204ENST00000554258 ESRP1Q6NXG1 681 aaKnown RBP17.25■□□□□ 0.35
NEK9-204ENST00000554258 MMS22LQ6ZRQ5 1243 aa17.25■□□□□ 0.35
NEK9-204ENST00000554258 HORMAD1Q86X24 394 aa17.25■□□□□ 0.35
NEK9-204ENST00000554258 VSTM4Q8IW00 320 aa17.25■□□□□ 0.35
NEK9-204ENST00000554258 CCDC117Q8IWD4 279 aaPredicted RBP17.25■□□□□ 0.35
NEK9-204ENST00000554258 SDR16C5Q8N3Y7 309 aa17.25■□□□□ 0.35
NEK9-204ENST00000554258 CARNMT1Q8N4J0 409 aa17.25■□□□□ 0.35
NEK9-204ENST00000554258 IL22RA1Q8N6P7 574 aa17.25■□□□□ 0.35
NEK9-204ENST00000554258 TMEM159Q96B96 161 aa17.25■□□□□ 0.35
NEK9-204ENST00000554258 MRFAP1L1Q96HT8 127 aa17.25■□□□□ 0.35
NEK9-204ENST00000554258 STK33Q9BYT3 514 aa17.25■□□□□ 0.35
NEK9-204ENST00000554258 TRIM5Q9C035 493 aa17.25■□□□□ 0.35
NEK9-204ENST00000554258 OLA1Q9NTK5 396 aaKnown RBP17.25■□□□□ 0.35
NEK9-204ENST00000554258 KLF15Q9UIH9 416 aa17.25■□□□□ 0.35
NEK9-204ENST00000554258 CCDC168Q8NDH2 2452 aa17.25■□□□□ 0.35
NEK9-204ENST00000554258 SHANK1Q9Y566 2161 aa17.25■□□□□ 0.35
NEK9-204ENST00000554258 DNHD1Q96M86 4753 aa17.24■□□□□ 0.35
NEK9-204ENST00000554258 ZNF891A8MT65 544 aaPredicted RBP17.24■□□□□ 0.35
NEK9-204ENST00000554258 C1QTNF3-AMACRE9PGA6 284 aa17.24■□□□□ 0.35
NEK9-204ENST00000554258 CNTN5O94779 1100 aa17.24■□□□□ 0.35
NEK9-204ENST00000554258 RPLP0P05388 317 aaKnown RBP17.24■□□□□ 0.35
NEK9-204ENST00000554258 LIFP15018 202 aa17.24■□□□□ 0.35
NEK9-204ENST00000554258 STK19P49842 368 aaPredicted RBP17.24■□□□□ 0.35
NEK9-204ENST00000554258 YWHAEP62258 255 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms