RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 SLC39A14Q15043 492 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 PLCB4Q15147 1175 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 FCN2Q15485 313 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 SMAD1Q15797 465 aaKnown RBP2.5□□□□□ -2.01
SRP54-204ENST00000553923 ADCK5Q3MIX3 580 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 WDR45BQ5MNZ6 344 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 C10orf76Q5T2E6 689 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 CFAP58Q5T655 872 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 RAP1GAP2Q684P5 730 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 SULT6B1Q6IMI4 303 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 JMJD6Q6NYC1 403 aaPredicted RBP2.5□□□□□ -2.01
SRP54-204ENST00000553923 MSANTD2Q6P1R3 559 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 TMEM71Q6P5X7 295 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 RINLQ6ZS11 566 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 KRT27Q7Z3Y8 459 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 MDGA2Q7Z553 956 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 DCUN1D3Q8IWE4 304 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 GALNT15Q8N3T1 639 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 PCYOX1LQ8NBM8 494 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 SRFBP1Q8NEF9 429 aaKnown RBP2.5□□□□□ -2.01
SRP54-204ENST00000553923 LILRB1Q8NHL6 650 aaPredicted RBP2.5□□□□□ -2.01
SRP54-204ENST00000553923 IP6K1Q92551 441 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 ATP6V1E2Q96A05 226 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 SNX27Q96L92 541 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 PAAF1Q9BRP4 392 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 CHCHD6Q9BRQ6 235 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 COLEC11Q9BWP8 271 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 EIF2AQ9BY44 585 aaKnown RBP2.5□□□□□ -2.01
SRP54-204ENST00000553923 EGLN1Q9GZT9 426 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 GFRA4Q9GZZ7 299 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 PCDHAC1Q9H158 963 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 ALDH8A1Q9H2A2 487 aaPredicted RBP2.5□□□□□ -2.01
SRP54-204ENST00000553923 OLA1Q9NTK5 396 aaKnown RBP2.5□□□□□ -2.01
SRP54-204ENST00000553923 FBXO28Q9NVF7 368 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 OCIAD1Q9NX40 245 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 KIF17Q9P2E2 1029 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 MYO1AQ9UBC5 1043 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 ARHGAP26Q9UNA1 814 aa2.5□□□□□ -2.01
SRP54-204ENST00000553923 RPGRIP1LQ68CZ1 1315 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 B9A039 149 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 PIP5K1BO14986 540 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 LDB2O43679 373 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 PLA2G6O60733 806 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 TNFRSF6BO95407 300 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 VIPP01282 170 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 RPN1P04843 607 aaKnown RBP2.49□□□□□ -2.01
SRP54-204ENST00000553923 SRGAP2BP0DMP2 458 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 VEGFAP15692 232 aaPredicted RBP2.49□□□□□ -2.01
SRP54-204ENST00000553923 PECAM1P16284 738 aaPredicted RBP2.49□□□□□ -2.01
SRP54-204ENST00000553923 EGR1P18146 543 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 CALRP27797 417 aaKnown RBP2.49□□□□□ -2.01
SRP54-204ENST00000553923 RAD52P43351 418 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 PKP1Q13835 747 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 SPARCL1Q14515 664 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 SLC5A9Q2M3M2 681 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 ZNF284Q2VY69 593 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 ARHGAP15Q53QZ3 475 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 ALG10Q5BKT4 473 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 ALG10BQ5I7T1 473 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 HAUS3Q68CZ6 603 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 PMS2CLQ68D20 193 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 LRRTM4Q86VH4 590 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 FJX1Q86VR8 437 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 TTC30AQ86WT1 665 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 CAMK1DQ8IU85 385 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 TMTC1Q8IUR5 882 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 STYXQ8WUJ0 223 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 AFG1LQ8WV93 481 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 BRI3BPQ8WY22 251 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 RILPL2Q969X0 211 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 RRP36Q96EU6 259 aaKnown RBP2.49□□□□□ -2.01
SRP54-204ENST00000553923 ZNF419Q96HQ0 510 aaPredicted RBP2.49□□□□□ -2.01
SRP54-204ENST00000553923 MAELQ96JY0 434 aaKnown RBP2.49□□□□□ -2.01
SRP54-204ENST00000553923 TIGD1Q96MW7 591 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 PYM1Q9BRP8 204 aaKnown RBP2.49□□□□□ -2.01
SRP54-204ENST00000553923 STK33Q9BYT3 514 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 KLHL31Q9H511 634 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 SFXN1Q9H9B4 322 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 WASH6PQ9NQA3 447 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 KRT84Q9NSB2 600 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 ISY1Q9ULR0 285 aaKnown RBP2.49□□□□□ -2.01
SRP54-204ENST00000553923 MAN2B2Q9Y2E5 1009 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 TTLL3Q9Y4R7 772 aa2.49□□□□□ -2.01
SRP54-204ENST00000553923 A0A1W2PPC4 97 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 A0A1W2PPH5 198 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 FAM234BA2RU67 622 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 GOLGA6L3A6NEY3 463 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 ANTXRLA6NF34 631 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 B4E171 279 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 IPO5O00410 1097 aaKnown RBP2.48□□□□□ -2.01
SRP54-204ENST00000553923 SYT5O00445 386 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 NPC1O15118 1278 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 AHCYL1O43865 530 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 ZBED4O75132 1171 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 NDST3O95803 873 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 ALDOCP09972 364 aaKnown RBP2.48□□□□□ -2.01
SRP54-204ENST00000553923 DAOP14920 347 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 RXRAP19793 462 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 GABRB3P28472 473 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 TSPAN7P41732 249 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms