RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 RANBP9Q96S59 729 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 PITPNM3Q9BZ71 974 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 NACA2Q9H009 215 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 MAGEH1Q9H213 219 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 PLAC1Q9HBJ0 212 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 RXFP1Q9HBX9 757 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 ARNT2Q9HBZ2 717 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 RBM22Q9NW64 420 aaKnown RBP eCLIP7.43□□□□□ -1.22
ATXN3-221ENST00000553498 ZFATQ9P243 1243 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 DCDC2Q9UHG0 476 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 ATXN7L1Q9ULK2 861 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-221ENST00000553498 SOX13Q9UN79 622 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 ATP11BQ9Y2G3 1177 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 ARL2BPQ9Y2Y0 163 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 RRP15Q9Y3B9 282 aaKnown RBP7.43□□□□□ -1.22
ATXN3-221ENST00000553498 USP15Q9Y4E8 981 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-221ENST00000553498 RPS6KL1Q9Y6S9 549 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 SCN1AP35498 2009 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 KAT6AQ92794 2004 aa7.43□□□□□ -1.22
ATXN3-221ENST00000553498 CXorf51AA0A1B0GTR3 108 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 A0A1W2PPM1 405 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 SERTM1A2A2V5 107 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 TRIM49D1C9J1S8 452 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 NT5C1B-RDH14C9J2C7 533 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 ACSL4O60488 711 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 EDF1O60869 148 aaKnown RBP7.42□□□□□ -1.22
ATXN3-221ENST00000553498 GLRA3O75311 464 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 RFPL1O75677 317 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 PAPSS2O95340 614 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-221ENST00000553498 OAS1P00973 400 aaKnown RBP7.42□□□□□ -1.22
ATXN3-221ENST00000553498 ATP5BP06576 529 aaKnown RBP7.42□□□□□ -1.22
ATXN3-221ENST00000553498 CELA2BP08218 269 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-221ENST00000553498 CREB1P16220 341 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 TAC1P20366 129 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 ADRA1DP25100 572 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 ALDH3A1P30838 453 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 ELF1P32519 619 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 PBX3P40426 434 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 GRIA1P42261 906 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 PGFP49763 221 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 NEK3P51956 506 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 EPHB3P54753 998 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 CDH4P55283 916 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 PSMA6P60900 246 aaKnown RBP7.42□□□□□ -1.22
ATXN3-221ENST00000553498 CDK18Q07002 472 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 CCDC15Q0P6D6 951 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 SERINC3Q13530 473 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 EFTUD2Q15029 972 aaKnown RBP eCLIP7.42□□□□□ -1.22
ATXN3-221ENST00000553498 LRRC14Q15048 493 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 ANKRD20A4Q4UJ75 823 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 SPOUT1Q5T280 376 aaKnown RBP7.42□□□□□ -1.22
ATXN3-221ENST00000553498 RASIP1Q5U651 963 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 FYB2Q5VWT5 728 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 ATG16L1Q676U5 607 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 RNF43Q68DV7 783 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 FBXL22Q6P050 247 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 PKN3Q6P5Z2 889 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 LVRNQ6Q4G3 990 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 PRSS55Q6UWB4 352 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-221ENST00000553498 PACS1Q6VY07 963 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 KIAA0408Q6ZU52 694 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 CCDC91Q7Z6B0 441 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 SETD3Q86TU7 594 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-221ENST00000553498 TMEM173Q86WV6 379 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-221ENST00000553498 MIB1Q86YT6 1006 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 HERC6Q8IVU3 1022 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 PPHLN1Q8NEY8 458 aaKnown RBP7.42□□□□□ -1.22
ATXN3-221ENST00000553498 OR52K1Q8NGK4 314 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 MGARPQ8TDB4 240 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 TCP10LQ8TDR4 215 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 BCL7CQ8WUZ0 217 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-221ENST00000553498 SCG3Q8WXD2 468 aaKnown RBP7.42□□□□□ -1.22
ATXN3-221ENST00000553498 ACDQ96AP0 544 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 IMP4Q96G21 291 aaKnown RBP7.42□□□□□ -1.22
ATXN3-221ENST00000553498 CELF6Q96J87 481 aaKnown RBP7.42□□□□□ -1.22
ATXN3-221ENST00000553498 ZNF512Q96ME7 567 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-221ENST00000553498 RPRD1AQ96P16 312 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-221ENST00000553498 TBL1YQ9BQ87 522 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 GORASP1Q9BQQ3 440 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 CLSTN3Q9BQT9 956 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 SIKE1Q9BRV8 207 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 MLPHQ9BV36 600 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-221ENST00000553498 MRPL17Q9NRX2 175 aaKnown RBP7.42□□□□□ -1.22
ATXN3-221ENST00000553498 SYBUQ9NX95 663 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 KLHL14Q9P2G3 628 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 PRKAG3Q9UGI9 489 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 MID2Q9UJV3 735 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 STOML2Q9UJZ1 356 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 PRDM4Q9UKN5 801 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 GRID1Q9ULK0 1009 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 PLLPQ9Y342 182 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 PCDHB12Q9Y5F1 795 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 PCDHGC4Q9Y5F7 938 aa7.42□□□□□ -1.22
ATXN3-221ENST00000553498 TSC2P49815 1807 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-221ENST00000553498 ZCWPW2A0A1B0GU75 182 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 ILVBLA1L0T0 632 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 HEATR9A2RTY3 570 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 CCT8L1PA6NM43 557 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 PRAMEF11O60813 436 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms