RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 RTP5Q14D33 572 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 POLD3Q15054 466 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-208ENST00000553370 ZNF284Q2VY69 593 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 TBC1D25Q3MII6 688 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 ARL13BQ3SXY8 428 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 SLC25A52Q3SY17 297 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 TAF1BQ53T94 588 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-208ENST00000553370 HSP90AA4PQ58FG1 418 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 SEL1L3Q68CR1 1132 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 DPY19L3Q6ZPD9 716 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 Q6ZSR6 202 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 GPR155Q7Z3F1 870 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 DCP2Q8IU60 420 aaKnown RBP10.11□□□□□ -0.79
ACTN1-208ENST00000553370 WDTC1Q8N5D0 677 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 PCDH20Q8N6Y1 951 aaKnown RBP10.11□□□□□ -0.79
ACTN1-208ENST00000553370 CHST14Q8NCH0 376 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 ZNF397Q8NF99 534 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-208ENST00000553370 OR7D4Q8NG98 312 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 OR2A12Q8NGT7 310 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 SNIP1Q8TAD8 396 aaKnown RBP10.11□□□□□ -0.79
ACTN1-208ENST00000553370 C18orf8Q96DM3 657 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 ALG14Q96F25 216 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 FEM1CQ96JP0 617 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 PSMB7Q99436 277 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 ARHGAP9Q9BRR9 750 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 DUSP23Q9BVJ7 150 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 HDAC8Q9BY41 377 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 TM6SF2Q9BZW4 377 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 ZYG11BQ9C0D3 744 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 UCKL1Q9NWZ5 548 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 ARHGEF38Q9NXL2 777 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 NLGN3Q9NZ94 848 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 DACH1Q9UI36 760 aa10.11□□□□□ -0.79
ACTN1-208ENST00000553370 A0A0D9SEW6 157 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 CPED1A4D0V7 1026 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 FOXN3O00409 490 aaPredicted RBP10.1□□□□□ -0.79
ACTN1-208ENST00000553370 KRIT1O00522 736 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 USP12O75317 370 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 CSO75390 466 aaKnown RBP10.1□□□□□ -0.79
ACTN1-208ENST00000553370 PRB1P04280 392 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 MPOP05164 745 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 TPM2P07951 284 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 CKMT1AP12532 417 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 ADRB3P13945 408 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 XPAP23025 273 aaPredicted RBP10.1□□□□□ -0.79
ACTN1-208ENST00000553370 RABIFP47224 123 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 SERPINH1P50454 418 aaKnown RBP10.1□□□□□ -0.79
ACTN1-208ENST00000553370 CCNHP51946 323 aaPredicted RBP10.1□□□□□ -0.79
ACTN1-208ENST00000553370 TMPRSS3P57727 454 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 TAS2R38P59533 333 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 ATP11AP98196 1134 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 CDO1Q16878 200 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 FOXR1Q6PIV2 292 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 ZNF783Q6ZMS7 281 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 GCNT7Q6ZNI0 430 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 KANSL1Q7Z3B3 1105 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 PARGQ86W56 976 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 FAM131BQ86XD5 332 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 LSMEM2Q8N112 164 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 PAF1Q8N7H5 531 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 DCBLD1Q8N8Z6 715 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 TMEM145Q8NBT3 493 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 ZNF248Q8NDW4 579 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 IFI44Q8TCB0 444 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 FAM131CQ96AQ9 280 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 APOLD1Q96LR9 279 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 NPY6RQ99463 290 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 IL12RB2Q99665 862 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 HEPHQ9BQS7 1158 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 OCSTAMPQ9BR26 566 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 SLC17A9Q9BYT1 436 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 CEP44Q9C0F1 390 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 USP29Q9HBJ7 922 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 METTL5Q9NRN9 209 aaKnown RBP10.1□□□□□ -0.79
ACTN1-208ENST00000553370 NCKIPSDQ9NZQ3 722 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 DOLKQ9UPQ8 538 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 FCF1Q9Y324 198 aaKnown RBP10.1□□□□□ -0.79
ACTN1-208ENST00000553370 PCDHB1Q9Y5F3 818 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 OR51B4Q9Y5P0 310 aa10.1□□□□□ -0.79
ACTN1-208ENST00000553370 LRP4O75096 1905 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 TEX51A0A1B0GUA7 166 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 ILVBLA1L0T0 632 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 ATXN7O15265 892 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-208ENST00000553370 OPA1O60313 960 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 NEBLO76041 1014 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 LSM8O95777 96 aaKnown RBP10.09□□□□□ -0.79
ACTN1-208ENST00000553370 CYP11B1P15538 503 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 TFE3P19532 575 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-208ENST00000553370 RBMS1P29558 406 aaKnown RBP10.09□□□□□ -0.79
ACTN1-208ENST00000553370 L1CAMP32004 1257 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 RPIAP49247 311 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 UCNP55089 124 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 COPS2P61201 443 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 UBE2HP62256 183 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 GNA12Q03113 381 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 SLC20A2Q08357 652 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 EIF4EBP2Q13542 120 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-208ENST00000553370 PDE1CQ14123 709 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-208ENST00000553370 DRAP1Q14919 205 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-208ENST00000553370 CDKN3Q16667 212 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms