RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 CCNHP51946 323 aaPredicted RBP9.25□□□□□ -0.93
SYNE2-209ENST00000553308 ADKP55263 362 aaKnown RBP9.25□□□□□ -0.93
SYNE2-209ENST00000553308 ARF5P84085 180 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 APBA1Q02410 837 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 MTA1Q13330 715 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 STIM1Q13586 685 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 SPIDRQ14159 915 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 PTPN20Q4JDL3 420 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 PRRT3Q5FWE3 981 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 C6orf132Q5T0Z8 1188 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 ARTNQ5T4W7 220 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 C11orf57Q6ZUT1 292 aaPredicted RBP9.25□□□□□ -0.93
SYNE2-209ENST00000553308 SLC26A9Q7LBE3 791 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 PHACTR4Q8IZ21 702 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 NELFBQ8WX92 580 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 NAT6Q93015 286 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 LENG8Q96PV6 779 aaPredicted RBP9.25□□□□□ -0.93
SYNE2-209ENST00000553308 NPY6RQ99463 290 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 HEPHQ9BQS7 1158 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 SPON2Q9BUD6 331 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 LRRC61Q9BV99 259 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 C1QTNF2Q9BXJ5 285 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 TM6SF2Q9BZW4 377 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 FAM117AQ9C073 453 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 ZDHHC6Q9H6R6 413 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 SPASTQ9UBP0 616 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 MAN1B1Q9UKM7 699 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 CTNND2Q9UQB3 1225 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 FCF1Q9Y324 198 aaKnown RBP9.25□□□□□ -0.93
SYNE2-209ENST00000553308 HEMK1Q9Y5R4 338 aaPredicted RBP9.25□□□□□ -0.93
SYNE2-209ENST00000553308 MAST4O15021 2626 aa9.25□□□□□ -0.93
SYNE2-209ENST00000553308 IGLV3-10A0A075B6K4 115 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 DRGXA6NNA5 263 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 LMO7DNF2Z398 122 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 NTN3O00634 580 aaPredicted RBP9.24□□□□□ -0.93
SYNE2-209ENST00000553308 RIOK3O14730 519 aaKnown RBP9.24□□□□□ -0.93
SYNE2-209ENST00000553308 TERTO14746 1132 aaKnown RBP9.24□□□□□ -0.93
SYNE2-209ENST00000553308 PLD2O14939 933 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 ANXA6P08133 673 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 CELA2BP08218 269 aaPredicted RBP9.24□□□□□ -0.93
SYNE2-209ENST00000553308 HGFP14210 728 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 BMP6P22004 513 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 OR1E1P30953 314 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 SLC5A2P31639 672 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 NOS2P35228 1153 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 IGFALSP35858 605 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 RPIAP49247 311 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 CXCR3P49682 368 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 SULT1E1P49888 294 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 SLC6A3Q01959 620 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 SGCGQ13326 291 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 TGIF1Q15583 401 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 ARHGAP44Q17R89 818 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 CARD16Q5EG05 197 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 BRMS1LQ5PSV4 323 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 TRIM65Q6PJ69 517 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 JAMLQ86YT9 394 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 PCDH20Q8N6Y1 951 aaKnown RBP9.24□□□□□ -0.93
SYNE2-209ENST00000553308 KYQ8NBH2 561 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 DENND6BQ8NEG7 585 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 ZNF397Q8NF99 534 aaPredicted RBP9.24□□□□□ -0.93
SYNE2-209ENST00000553308 OR6K2Q8NGY2 324 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 BTN2A2Q8WVV5 523 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 EXTL1Q92935 676 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 LIN37Q96GY3 246 aaPredicted RBP9.24□□□□□ -0.93
SYNE2-209ENST00000553308 CRACR2AQ9BSW2 395 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 FOXP3Q9BZS1 431 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 CEP44Q9C0F1 390 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 CLPBQ9H078 707 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 WDCPQ9H6R7 721 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 EPB41L5Q9HCM4 733 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 ATP13A1Q9HD20 1204 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 PLCB1Q9NQ66 1216 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 ZNF212Q9UDV6 495 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 IL17BQ9UHF5 180 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 RABGEF1Q9UJ41 708 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 PADI4Q9UM07 663 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 PCDHGC3Q9UN70 934 aa9.24□□□□□ -0.93
SYNE2-209ENST00000553308 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.24□□□□□ -0.93
SYNE2-209ENST00000553308 FAM170AA1A519 330 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 ILVBLA1L0T0 632 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 PPP1R3GB7ZBB8 358 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 NEMP1O14524 444 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 YY2O15391 372 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 TSPAN6O43657 245 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 NOBOXO60393 691 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 SRGAP2O75044 1071 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 CD160O95971 181 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 FAM87AP0C7U9 286 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 TSHRP16473 764 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 UGT1A5P35504 534 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 THOP1P52888 689 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 MARSP56192 900 aaKnown RBP9.23□□□□□ -0.93
SYNE2-209ENST00000553308 STX17P56962 302 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 RNASE9P60153 205 aaKnown RBP9.23□□□□□ -0.93
SYNE2-209ENST00000553308 DEUP1Q05D60 604 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 SRSF1Q07955 248 aaKnown RBP eCLIP9.23□□□□□ -0.93
SYNE2-209ENST00000553308 TCEA2Q15560 299 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 LRRC73Q5JTD7 316 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 RETSATQ6NUM9 610 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms