RNA–Protein interactions for RNA: ENST00000552984.1

TUBA1B-208, Transcript of tubulin alpha 1b, human

TSL 4

Gene TUBA1B, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1B-208	ENST00000552984	TMEM248	Q9NWD8	314 aa		11.7	□□□□□ -0.54
TUBA1B-208	ENST00000552984	ADAM22	Q9P0K1	906 aa		11.7	□□□□□ -0.54
TUBA1B-208	ENST00000552984	LIMA1	Q9UHB6	759 aa	Known RBP	11.7	□□□□□ -0.54
TUBA1B-208	ENST00000552984	FADS3	Q9Y5Q0	445 aa		11.7	□□□□□ -0.54
TUBA1B-208	ENST00000552984	KRIT1	O00522	736 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	MAGEC1	O60732	1142 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	PIAS2	O75928	621 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	PAK4	O96013	591 aa	Predicted RBP	11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	UGT2B4	P06133	528 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	TPM2	P07951	284 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	KRT3	P12035	628 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	ATP1A3	P13637	1013 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	CKMT2	P17540	419 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	ITIH2	P19823	946 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	ANP32A	P39687	249 aa	Known RBP	11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	MAPKAPK2	P49137	400 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	RPL7A	P62424	266 aa	Known RBP	11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	INSM1	Q01101	510 aa	Predicted RBP	11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	MYL5	Q02045	173 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	OGDH	Q02218	1023 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	NRG1	Q02297	640 aa	Predicted RBP	11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	UBXN1	Q04323	297 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	COL9A2	Q14055	689 aa	Predicted RBP	11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	NCAPH	Q15003	741 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	ARL13B	Q3SXY8	428 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	NEK5	Q6P3R8	708 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	TRIM72	Q6ZMU5	477 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984		Q6ZSR6	202 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	TMC6	Q7Z403	805 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	PDZD3	Q86UT5	571 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	ZNF354C	Q86Y25	554 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	DNAAF5	Q86Y56	855 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	PHF13	Q86YI8	300 aa	Predicted RBP	11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	PDCD7	Q8N8D1	485 aa	Known RBP	11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	NEK11	Q8NG66	645 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	BAP1	Q92560	729 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	LRIG1	Q96JA1	1093 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	MCEE	Q96PE7	176 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	OSBPL2	Q9H1P3	480 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	KLHL11	Q9NVR0	708 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	DKK4	Q9UBT3	224 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	KLF15	Q9UIH9	416 aa		11.69	□□□□□ -0.54
TUBA1B-208	ENST00000552984	SMG1	Q96Q15	3661 aa	Known RBP	11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	IGLON5	A6NGN9	336 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	C16orf96	A6NNT2	1141 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984		A6NNZ2	444 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	ATMIN	O43313	823 aa	Predicted RBP	11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	TLX3	O43711	291 aa	Predicted RBP	11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	RAMP2	O60895	175 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	TMCC1	O94876	653 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	HNF1B	P35680	557 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	GSC	P56915	257 aa	Predicted RBP	11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	RPS21	P63220	83 aa	Known RBP	11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	DAB2	P98082	770 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	SEMG2	Q02383	582 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	FZD2	Q14332	565 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	POLD3	Q15054	466 aa	Predicted RBP	11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	STX1A	Q16623	288 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	ACBD5	Q5T8D3	534 aa	Predicted RBP	11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	KIAA1161	Q6NSJ0	714 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	DNAJC24	Q6P3W2	148 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	SCYL2	Q6P3W7	929 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	SASS6	Q6UVJ0	657 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	AOPEP	Q8N6M6	819 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	C3orf20	Q8ND61	904 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	OR2AP1	Q8NGE2	309 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	OR4C6	Q8NH72	309 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	NXPE2	Q96DL1	559 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	HMCES	Q96FZ2	354 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	EXOC2	Q96KP1	924 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	KLHL32	Q96NJ5	620 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	KLF6	Q99612	283 aa	Predicted RBP	11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	AGPAT1	Q99943	283 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	SLC17A9	Q9BYT1	436 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	GPR27	Q9NS67	375 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	GPATCH2L	Q9NWQ4	482 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	DNAJC28	Q9NX36	388 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	TAS2R14	Q9NYV8	317 aa		11.68	□□□□□ -0.54
TUBA1B-208	ENST00000552984	LY6G6E	A0A0G2JKS1	128 aa		11.67	□□□□□ -0.54
TUBA1B-208	ENST00000552984	CASC3	O15234	703 aa	Known RBP	11.67	□□□□□ -0.54
TUBA1B-208	ENST00000552984	INSIG1	O15503	277 aa		11.67	□□□□□ -0.54
TUBA1B-208	ENST00000552984	CREB3	O43889	395 aa		11.67	□□□□□ -0.54
TUBA1B-208	ENST00000552984	GSR	P00390	522 aa		11.67	□□□□□ -0.54
TUBA1B-208	ENST00000552984	CALB1	P05937	261 aa		11.67	□□□□□ -0.54
TUBA1B-208	ENST00000552984	C1S	P09871	688 aa		11.67	□□□□□ -0.54
TUBA1B-208	ENST00000552984	ACP1	P24666	158 aa		11.67	□□□□□ -0.54
TUBA1B-208	ENST00000552984	ITPKB	P27987	946 aa		11.67	□□□□□ -0.54
TUBA1B-208	ENST00000552984	EPHB2	P29323	1055 aa		11.67	□□□□□ -0.54
TUBA1B-208	ENST00000552984	SLC20A2	Q08357	652 aa		11.67	□□□□□ -0.54
TUBA1B-208	ENST00000552984	CCDC15	Q0P6D6	951 aa		11.67	□□□□□ -0.54
TUBA1B-208	ENST00000552984	ZNF211	Q13398	564 aa	Predicted RBP	11.67	□□□□□ -0.54
TUBA1B-208	ENST00000552984	ZNF805	Q5CZA5	627 aa		11.67	□□□□□ -0.54
TUBA1B-208	ENST00000552984	PPP1R15B	Q5SWA1	713 aa		11.67	□□□□□ -0.54
TUBA1B-208	ENST00000552984	KYAT3	Q6YP21	454 aa	Known RBP	11.67	□□□□□ -0.54
TUBA1B-208	ENST00000552984	SLFN11	Q7Z7L1	901 aa		11.67	□□□□□ -0.54
TUBA1B-208	ENST00000552984	RBFA	Q8N0V3	343 aa		11.67	□□□□□ -0.54
TUBA1B-208	ENST00000552984	RTL3	Q8N8U3	475 aa	Known RBP	11.67	□□□□□ -0.54
TUBA1B-208	ENST00000552984	NTAN1	Q96AB6	310 aa		11.67	□□□□□ -0.54
TUBA1B-208	ENST00000552984	APOLD1	Q96LR9	279 aa		11.67	□□□□□ -0.54
TUBA1B-208	ENST00000552984	BBC3	Q96PG8	261 aa	Predicted RBP	11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms