RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 RBM43Q6ZSC3 357 aaKnown RBP11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 FAM186BQ8IYM0 893 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 RBFAQ8N0V3 343 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 CHST14Q8NCH0 376 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 TMEM74Q96NL1 305 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 GFM1Q96RP9 751 aaKnown RBP11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 LRRC61Q9BV99 259 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 C1QTNF2Q9BXJ5 285 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 B3GNT4Q9C0J1 378 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 RBSNQ9H1K0 784 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 MMRN2Q9H8L6 949 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 LRRC4CQ9HCJ2 640 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 FOXJ2Q9P0K8 574 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 PISDQ9UG56 409 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 COQ4Q9Y3A0 265 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 FADS3Q9Y5Q0 445 aa11.61□□□□□ -0.55
SUPT16H-202ENST00000552829 LRP4O75096 1905 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 KCNU1A8MYU2 1149 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 C9orf172C9J069 976 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 F5H5T6 163 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 BIN1O00499 593 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 ACTN4O43707 911 aaKnown RBP11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 AP1G1O43747 822 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 APOEP02649 317 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 PRNPP04156 253 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 NR2F2P24468 414 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 CLCN1P35523 988 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 CD97P48960 835 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 MXI1P50539 228 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 C1orf61Q13536 156 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 CUL2Q13617 745 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 PDE1CQ14123 709 aaPredicted RBP11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 NCAPHQ15003 741 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 CNGA2Q16280 664 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 BORAQ6PGQ7 559 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 ZSCAN30Q86W11 494 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 CEP57L1Q8IYX8 460 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 RNF214Q8ND24 703 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 ASB12Q8WXK4 309 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 MIB2Q96AX9 1013 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 FEM1CQ96JP0 617 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 TIGD1Q96MW7 591 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 PPP1R9BQ96SB3 815 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 PSMB7Q99436 277 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 EXOC1Q9NV70 894 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 IPO11Q9UI26 975 aaKnown RBP11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 TBC1D30Q9Y2I9 924 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 LOXL2Q9Y4K0 774 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 FBN2P35556 2912 aa11.6□□□□□ -0.55
SUPT16H-202ENST00000552829 DOCK4Q8N1I0 1966 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 K7ERQ8 282 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 FPGTO14772 594 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 BNIP3LO60238 219 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 ZNF821O75541 412 aaPredicted RBP11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 ANXA6P08133 673 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 PAEPP09466 180 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 JMJD7P0C870 316 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 TSHRP16473 764 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 ITIH1P19827 911 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 CD82P27701 267 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 PSMC2P35998 433 aaKnown RBP11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 IRAK1P51617 712 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 POLE2P56282 527 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 ARSIQ5FYB1 569 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 ISM2Q6H9L7 571 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 ESRP1Q6NXG1 681 aaKnown RBP11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 FBXL22Q6P050 247 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 LVRNQ6Q4G3 990 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 PHACTR4Q8IZ21 702 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 SDR16C5Q8N3Y7 309 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 ARL10Q8N8L6 244 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 USP7Q93009 1102 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 CCDC74AQ96AQ1 378 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 TMEM159Q96B96 161 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 PPP1R13BQ96KQ4 1090 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 EPAS1Q99814 870 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 REPIN1Q9BWE0 567 aaKnown RBP11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 GRPEL1Q9HAV7 217 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 DYRK4Q9NR20 520 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 PLEKHB1Q9UF11 243 aaPredicted RBP11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 APOBEC3BQ9UH17 382 aaKnown RBP11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 PLAAQ9Y263 795 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 WASF2Q9Y6W5 498 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 HIVEP3Q5T1R4 2406 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 SPENQ96T58 3664 aaKnown RBP11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 ESPL1Q14674 2120 aa11.59□□□□□ -0.55
SUPT16H-202ENST00000552829 SMAD6O43541 496 aaKnown RBP11.58□□□□□ -0.56
SUPT16H-202ENST00000552829 TRUB2O95900 331 aaKnown RBP11.58□□□□□ -0.56
SUPT16H-202ENST00000552829 CELA2BP08218 269 aaPredicted RBP11.58□□□□□ -0.56
SUPT16H-202ENST00000552829 ADRB3P13945 408 aa11.58□□□□□ -0.56
SUPT16H-202ENST00000552829 NEK3P51956 506 aa11.58□□□□□ -0.56
SUPT16H-202ENST00000552829 YWHAEP62258 255 aaKnown RBP11.58□□□□□ -0.56
SUPT16H-202ENST00000552829 PITX1P78337 314 aaPredicted RBP11.58□□□□□ -0.56
SUPT16H-202ENST00000552829 CENPCQ03188 943 aa11.58□□□□□ -0.56
SUPT16H-202ENST00000552829 STX1AQ16623 288 aa11.58□□□□□ -0.56
SUPT16H-202ENST00000552829 C5orf22Q49AR2 442 aa11.58□□□□□ -0.56
SUPT16H-202ENST00000552829 ANO6Q4KMQ2 910 aa11.58□□□□□ -0.56
SUPT16H-202ENST00000552829 ZCWPW2Q504Y3 356 aa11.58□□□□□ -0.56
SUPT16H-202ENST00000552829 RABGAP1LQ5R372 815 aa11.58□□□□□ -0.56
SUPT16H-202ENST00000552829 ATP6V0D2Q8N8Y2 350 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms