RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 CPSF2Q9P2I0 782 aaKnown RBP10.14□□□□□ -0.79
LETMD1-234ENST00000552645 CORO1CQ9ULV4 474 aaPredicted RBP10.14□□□□□ -0.79
LETMD1-234ENST00000552645 SNX12Q9UMY4 172 aa10.14□□□□□ -0.79
LETMD1-234ENST00000552645 INVSQ9Y283 1065 aa10.14□□□□□ -0.79
LETMD1-234ENST00000552645 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.14□□□□□ -0.79
LETMD1-234ENST00000552645 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.14□□□□□ -0.79
LETMD1-234ENST00000552645 R4GN57 208 aa10.14□□□□□ -0.79
LETMD1-234ENST00000552645 WASH4PA8MWX3 477 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 AHCYL1O43865 530 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 SIN3BO75182 1162 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 ATP6V1G2O95670 118 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 FTCDO95954 541 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 TCP1P17987 556 aaKnown RBP10.13□□□□□ -0.79
LETMD1-234ENST00000552645 GABRG2P18507 467 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 SCTRP47872 440 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 MARCKSL1P49006 195 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 PAPOLAP51003 745 aaKnown RBP10.13□□□□□ -0.79
LETMD1-234ENST00000552645 PTPN5P54829 565 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 C2orf54Q08AI8 447 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 DLG2Q15700 870 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 PARP15Q460N3 678 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 CFAP58Q5T655 872 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 LRRC38Q5VT99 294 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 Q6ZVU0 165 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 PEX26Q7Z412 305 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 RFX6Q8HWS3 928 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 TP53INP2Q8IXH6 220 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 UMODL1-AS1Q8N2C9 162 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 SH2D3CQ8N5H7 860 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 CAMKK1Q8N5S9 505 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.13□□□□□ -0.79
LETMD1-234ENST00000552645 KRT35Q92764 455 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 MYO19Q96H55 970 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 GDAP1L1Q96MZ0 367 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 MAK16Q9BXY0 300 aaKnown RBP10.13□□□□□ -0.79
LETMD1-234ENST00000552645 ACE2Q9BYF1 805 aaPredicted RBP10.13□□□□□ -0.79
LETMD1-234ENST00000552645 SLC39A8Q9C0K1 460 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 KLC2Q9H0B6 622 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 TNKS2Q9H2K2 1166 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 RABEP2Q9H5N1 569 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 PRSS16Q9NQE7 514 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 HAUS2Q9NVX0 235 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 DDX56Q9NY93 547 aaKnown RBP10.13□□□□□ -0.79
LETMD1-234ENST00000552645 SUN2Q9UH99 717 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 C15orf41Q9Y2V0 281 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 CAPN6Q9Y6Q1 641 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 SPAG17Q6Q759 2223 aa10.13□□□□□ -0.79
LETMD1-234ENST00000552645 FANCMQ8IYD8 2048 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 EDDM13A0A1B0GTR0 161 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 ARHGAP42A6NI28 874 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 ENC1O14682 589 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 DCLK1O15075 740 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 AXIN1O15169 862 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 SMAD6O43541 496 aaKnown RBP10.12□□□□□ -0.79
LETMD1-234ENST00000552645 PSTPIP1O43586 416 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 KDELR3O43731 214 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 SMNDC1O75940 238 aaKnown RBP eCLIP10.12□□□□□ -0.79
LETMD1-234ENST00000552645 PAPSS2O95340 614 aaPredicted RBP10.12□□□□□ -0.79
LETMD1-234ENST00000552645 MAP3K6O95382 1288 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 FESP07332 822 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 SRCP12931 536 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 NDUFV2P19404 249 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 IL4RP24394 825 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 ARSEP51690 589 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 RPS6KA3P51812 740 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 NDST2P52849 883 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 YBEYP58557 167 aaPredicted RBP10.12□□□□□ -0.79
LETMD1-234ENST00000552645 DYNLT1P63172 113 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 ARF5P84085 180 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 SRSF5Q13243 272 aaKnown RBP10.12□□□□□ -0.79
LETMD1-234ENST00000552645 SERINC3Q13530 473 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 ENPP2Q13822 863 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 HNRNPA1L2Q32P51 320 aaKnown RBP10.12□□□□□ -0.79
LETMD1-234ENST00000552645 KAZNQ674X7 775 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 TMPRSS6Q8IU80 811 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 CREG2Q8IUH2 290 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 RYBPQ8N488 228 aaPredicted RBP10.12□□□□□ -0.79
LETMD1-234ENST00000552645 TRIM58Q8NG06 486 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 PCDH19Q8TAB3 1148 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 RLN3Q8WXF3 142 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 CAPZA3Q96KX2 299 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 ZNF670Q9BS34 389 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 MKRN2Q9H000 416 aaKnown RBP10.12□□□□□ -0.79
LETMD1-234ENST00000552645 LRRC19Q9H756 370 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 PRDM16Q9HAZ2 1276 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 SP110Q9HB58 689 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 ZSCAN32Q9NX65 697 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 RCOR3Q9P2K3 495 aaPredicted RBP10.12□□□□□ -0.79
LETMD1-234ENST00000552645 AMFRQ9UKV5 643 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 PACSIN2Q9UNF0 486 aaPredicted RBP10.12□□□□□ -0.79
LETMD1-234ENST00000552645 HS3ST2Q9Y278 367 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 FCF1Q9Y324 198 aaKnown RBP10.12□□□□□ -0.79
LETMD1-234ENST00000552645 CEP192Q8TEP8 1941 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 ABCA7Q8IZY2 2146 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 THADAQ6YHU6 1953 aa10.12□□□□□ -0.79
LETMD1-234ENST00000552645 GMNCA6NCL1 334 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 CFAP73A6NFT4 308 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 J3KR12 359 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 MFSD11O43934 449 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 RNASEH1O60930 286 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms