RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 NOX1Q9Y5S8 564 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 MYH7P12883 1935 aa2.59□□□□□ -1.99
CPSF6-207ENST00000551516 CACNA1EQ15878 2313 aa2.59□□□□□ -2
CPSF6-207ENST00000551516 GCN1Q92616 2671 aaKnown RBP2.59□□□□□ -2
CPSF6-207ENST00000551516 FANCMQ8IYD8 2048 aa2.59□□□□□ -2
CPSF6-207ENST00000551516 KAT6AQ92794 2004 aa2.59□□□□□ -2
CPSF6-207ENST00000551516 COL1A2P08123 1366 aa2.59□□□□□ -2
CPSF6-207ENST00000551516 ASXL3Q9C0F0 2248 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 RALGAPA2Q2PPJ7 1873 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 PLXNA4Q9HCM2 1894 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 MGAQ8IWI9 3026 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 PRAMEF33A0A0G2JMD5 474 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 FAM234BA2RU67 622 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 CYSRT1A8MQ03 144 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 LGALS16A8MUM7 142 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 PATE3B3GLJ2 98 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 F5H697 171 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 H7C4K7 107 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 TAF4O00268 1085 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 PTGESO14684 152 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 PIP5K1BO14986 540 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 DCLK1O15075 740 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 NPC1O15118 1278 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 TRIM24O15164 1050 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 RGS10O43665 173 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 TRIAP1O43715 76 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 CCNT2O60583 730 aaKnown RBP2.58□□□□□ -2
CPSF6-207ENST00000551516 PRAMEF10O60809 474 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 COQ9O75208 318 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 PIAS2O75928 621 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 SCAF4O95104 1147 aaKnown RBP2.58□□□□□ -2
CPSF6-207ENST00000551516 RASAL1O95294 804 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 PAPSS2O95340 614 aaPredicted RBP2.58□□□□□ -2
CPSF6-207ENST00000551516 VTNP04004 478 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 ADRB1P08588 477 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 STAG3L1P0CL83 205 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 LAMP2P13473 410 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 HSD3B1P14060 373 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 LAG3P18627 525 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 RXRAP19793 462 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 CHRM3P20309 590 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 FGFR4P22455 802 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 PAX3P23760 479 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 PDIA3P30101 505 aaKnown RBP2.58□□□□□ -2
CPSF6-207ENST00000551516 HOXA6P31267 233 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 PTDSS1P48651 473 aaKnown RBP2.58□□□□□ -2
CPSF6-207ENST00000551516 NDUFV1P49821 464 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 TOB1P50616 345 aaPredicted RBP2.58□□□□□ -2
CPSF6-207ENST00000551516 ANXA11P50995 505 aaKnown RBP2.58□□□□□ -2
CPSF6-207ENST00000551516 RENBPP51606 427 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 DGKEP52429 567 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 ITGA8P53708 1063 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 PRKAG1P54619 331 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 RPS7P62081 194 aaKnown RBP2.58□□□□□ -2
CPSF6-207ENST00000551516 GPC5P78333 572 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 POU5F1BQ06416 359 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 TDGQ13569 410 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 BOP1Q14137 746 aaKnown RBP2.58□□□□□ -2
CPSF6-207ENST00000551516 PTK2BQ14289 1009 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 SPARCL1Q14515 664 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 HLXQ14774 488 aaPredicted RBP2.58□□□□□ -2
CPSF6-207ENST00000551516 LETM2Q2VYF4 491 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 ZNF528Q3MIS6 628 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 XKR4Q5GH76 650 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 EARS2Q5JPH6 523 aaKnown RBP2.58□□□□□ -2
CPSF6-207ENST00000551516 ZNF484Q5JVG2 852 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 TTC22Q5TAA0 569 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 C1QL3Q5VWW1 255 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 PLPP4Q5VZY2 271 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 MZT2AQ6P582 158 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 CRTC1Q6UUV9 634 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 PARM1Q6UWI2 310 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 TMEM108Q6UXF1 575 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 ALKAL1Q6UXT8 129 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 CYP26C1Q6V0L0 522 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 Q6ZRM9 215 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 Q6ZSN1 163 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 RFX8Q6ZV50 586 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 HTR3DQ70Z44 454 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 GDF7Q7Z4P5 450 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 IQCA1Q86XH1 822 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 SPARTQ8N0X7 666 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 VPS52Q8N1B4 723 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 LNX1Q8TBB1 728 aaPredicted RBP2.58□□□□□ -2
CPSF6-207ENST00000551516 FAM71BQ8TC56 605 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 SNX19Q92543 992 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 CASP10Q92851 521 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 ATOH1Q92858 354 aaPredicted RBP2.58□□□□□ -2
CPSF6-207ENST00000551516 PPP2R3CQ969Q6 453 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 RSPRY1Q96DX4 576 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 PGBD1Q96JS3 809 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 ADOQ96SZ5 270 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 NELL2Q99435 816 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 NAP1L4Q99733 375 aaKnown RBP2.58□□□□□ -2
CPSF6-207ENST00000551516 HSD17B14Q9BPX1 270 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 CLSTN3Q9BQT9 956 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 ZSWIM1Q9BR11 485 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 PAAF1Q9BRP4 392 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 PTDSS2Q9BVG9 487 aa2.58□□□□□ -2
CPSF6-207ENST00000551516 SLC46A2Q9BY10 475 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms