RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 KCNMA1Q12791 1236 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 EIF4EBP2Q13542 120 aaPredicted RBP7□□□□□ -1.29
PRPF40B-214ENST00000551320 MORC3Q14149 939 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 ELAVL3Q14576 367 aaKnown RBP7□□□□□ -1.29
PRPF40B-214ENST00000551320 STAT4Q14765 748 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 CDKN3Q16667 212 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 ZNF284Q2VY69 593 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 DEFB133Q30KQ1 61 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 PTPN20Q4JDL3 420 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 KCTD16Q68DU8 428 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 GUSBP11Q6P575 273 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 GCNT7Q6ZNI0 430 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 DPY19L3Q6ZPD9 716 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 Q6ZSR6 202 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 PTAR1Q7Z6K3 402 aaPredicted RBP7□□□□□ -1.29
PRPF40B-214ENST00000551320 TMEM110Q86TL2 294 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 PRPF39Q86UA1 669 aaKnown RBP7□□□□□ -1.29
PRPF40B-214ENST00000551320 SLC47A2Q86VL8 602 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 SFTPA2Q8IWL1 248 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 RBFAQ8N0V3 343 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 SH2D3CQ8N5H7 860 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 ATP6V0D2Q8N8Y2 350 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 MFSD2AQ8NA29 543 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 ATP11CQ8NB49 1132 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 OR2A12Q8NGT7 310 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 OR8D1Q8WZ84 308 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 AZIN2Q96A70 460 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 NXPE2Q96DL1 559 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 KLHDC7BQ96G42 594 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 PPP1R13BQ96KQ4 1090 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 BMFQ96LC9 184 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 SPAG5Q96R06 1193 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 TBCBQ99426 244 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 DDX50Q9BQ39 737 aaKnown RBP7□□□□□ -1.29
PRPF40B-214ENST00000551320 TM6SF2Q9BZW4 377 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 SYNDIG1Q9H7V2 258 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 FBRSQ9HAH7 460 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 GPAMQ9HCL2 828 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 NDFIP2Q9NV92 336 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 RMND1Q9NWS8 449 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 DNAJC28Q9NX36 388 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 DKK4Q9UBT3 224 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 VPS51Q9UID3 782 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 FZD4Q9ULV1 537 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 CLCA2Q9UQC9 943 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 DYRK1BQ9Y463 629 aa7□□□□□ -1.29
PRPF40B-214ENST00000551320 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7□□□□□ -1.29
PRPF40B-214ENST00000551320 RP1P56715 2156 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 FLNCQ14315 2725 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 TCAF2A6NFQ2 919 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 IGLON5A6NGN9 336 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 FOXN3O00409 490 aaPredicted RBP6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 MCF2LO15068 1137 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 MUSKO15146 869 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 OPA1O60313 960 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 CSO75390 466 aaKnown RBP6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 LEFTY1O75610 366 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 PRKCGP05129 697 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 RHOCP08134 193 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 PLA2G2AP14555 144 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 HNF1BP35680 557 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 RXRGP48443 463 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 SULT1E1P49888 294 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 ZNF445P59923 1031 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 GABREP78334 506 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 CDK17Q00537 523 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 ZNF177Q13360 481 aaPredicted RBP6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 INAVAQ3KP66 663 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 C3orf38Q5JPI3 329 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 PERM1Q5SV97 790 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 ATXN7L2Q5T6C5 722 aaPredicted RBP6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 TRIM65Q6PJ69 517 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 OLFML1Q6UWY5 402 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 LRRC69Q6ZNQ3 347 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 IRF2BP1Q8IU81 584 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 DRC7Q8IY82 874 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 ZNF683Q8IZ20 524 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 EMC1Q8N766 993 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 DCBLD1Q8N8Z6 715 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 FGF11Q92914 225 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 ATXN7L3BQ96GX2 97 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 DHTKD1Q96HY7 919 aaPredicted RBP6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 FAXDC2Q96IV6 333 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 APOLD1Q96LR9 279 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 CEP63Q96MT8 703 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 SLC2A13Q96QE2 648 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 LGMNQ99538 433 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 TRIM4Q9C037 500 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 TKTL2Q9H0I9 626 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 THAP9Q9H5L6 903 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 SIX2Q9NPC8 291 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 SLC25A13Q9UJS0 675 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 SCML1Q9UN30 329 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 CNTN6Q9UQ52 1028 aa6.99□□□□□ -1.29
PRPF40B-214ENST00000551320 SOWAHDA6NJG2 315 aa6.98□□□□□ -1.29
PRPF40B-214ENST00000551320 FAM72CH0Y354 149 aa6.98□□□□□ -1.29
PRPF40B-214ENST00000551320 PRAMEF26H0Y7S4 382 aa6.98□□□□□ -1.29
PRPF40B-214ENST00000551320 K7ESM1 405 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms