RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 MFRPQ9BY79 579 aa13.71□□□□□ -0.21
SNRPF-203ENST00000551316 IRX2Q9BZI1 471 aaPredicted RBP13.71□□□□□ -0.21
SNRPF-203ENST00000551316 MBNL1Q9NR56 388 aaKnown RBP13.71□□□□□ -0.21
SNRPF-203ENST00000551316 DOLKQ9UPQ8 538 aa13.71□□□□□ -0.21
SNRPF-203ENST00000551316 KCTD3Q9Y597 815 aa13.71□□□□□ -0.21
SNRPF-203ENST00000551316 PIK3R2O00459 728 aa13.7□□□□□ -0.22
SNRPF-203ENST00000551316 CAPN5O15484 640 aaPredicted RBP13.7□□□□□ -0.22
SNRPF-203ENST00000551316 SMAD6O43541 496 aaKnown RBP13.7□□□□□ -0.22
SNRPF-203ENST00000551316 ADRB3P13945 408 aa13.7□□□□□ -0.22
SNRPF-203ENST00000551316 NNMTP40261 264 aa13.7□□□□□ -0.22
SNRPF-203ENST00000551316 THOP1P52888 689 aa13.7□□□□□ -0.22
SNRPF-203ENST00000551316 OR1D5P58170 312 aa13.7□□□□□ -0.22
SNRPF-203ENST00000551316 CLDN10P78369 228 aa13.7□□□□□ -0.22
SNRPF-203ENST00000551316 CENPCQ03188 943 aa13.7□□□□□ -0.22
SNRPF-203ENST00000551316 DPYDQ12882 1025 aa13.7□□□□□ -0.22
SNRPF-203ENST00000551316 C1orf220Q5T0J3 134 aa13.7□□□□□ -0.22
SNRPF-203ENST00000551316 CPZQ66K79 652 aa13.7□□□□□ -0.22
SNRPF-203ENST00000551316 SP5Q6BEB4 398 aaPredicted RBP13.7□□□□□ -0.22
SNRPF-203ENST00000551316 SPNS3Q6ZMD2 512 aa13.7□□□□□ -0.22
SNRPF-203ENST00000551316 HID1Q8IV36 788 aa13.7□□□□□ -0.22
SNRPF-203ENST00000551316 CCDC117Q8IWD4 279 aaPredicted RBP13.7□□□□□ -0.22
SNRPF-203ENST00000551316 NELFCDQ8IXH7 590 aa13.7□□□□□ -0.22
SNRPF-203ENST00000551316 NLGN4XQ8N0W4 816 aa13.7□□□□□ -0.22
SNRPF-203ENST00000551316 CCAR2Q8N163 923 aaKnown RBP13.7□□□□□ -0.22
SNRPF-203ENST00000551316 NLGN4YQ8NFZ3 816 aaPredicted RBP13.7□□□□□ -0.22
SNRPF-203ENST00000551316 PARD3BQ8TEW8 1205 aa13.7□□□□□ -0.22
SNRPF-203ENST00000551316 RTP4Q96DX8 246 aa13.7□□□□□ -0.22
SNRPF-203ENST00000551316 PDXPQ96GD0 296 aa13.7□□□□□ -0.22
SNRPF-203ENST00000551316 LENG8Q96PV6 779 aaPredicted RBP13.7□□□□□ -0.22
SNRPF-203ENST00000551316 HDAC8Q9BY41 377 aa13.7□□□□□ -0.22
SNRPF-203ENST00000551316 EDEM3Q9BZQ6 932 aa13.7□□□□□ -0.22
SNRPF-203ENST00000551316 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.7□□□□□ -0.22
SNRPF-203ENST00000551316 OR51B4Q9Y5P0 310 aa13.7□□□□□ -0.22
SNRPF-203ENST00000551316 WASF2Q9Y6W5 498 aa13.7□□□□□ -0.22
SNRPF-203ENST00000551316 ACANP16112 2415 aa13.7□□□□□ -0.22
SNRPF-203ENST00000551316 TYW5A2RUC4 315 aaKnown RBP13.69□□□□□ -0.22
SNRPF-203ENST00000551316 HGSO14964 777 aaPredicted RBP13.69□□□□□ -0.22
SNRPF-203ENST00000551316 SNAP91O60641 907 aa13.69□□□□□ -0.22
SNRPF-203ENST00000551316 CBX6O95503 412 aa13.69□□□□□ -0.22
SNRPF-203ENST00000551316 HLA-DRAP01903 254 aa13.69□□□□□ -0.22
SNRPF-203ENST00000551316 GLB1P16278 677 aa13.69□□□□□ -0.22
SNRPF-203ENST00000551316 RRM1P23921 792 aa13.69□□□□□ -0.22
SNRPF-203ENST00000551316 HK3P52790 923 aa13.69□□□□□ -0.22
SNRPF-203ENST00000551316 PMS2P54278 862 aa13.69□□□□□ -0.22
SNRPF-203ENST00000551316 DAOAP59103 153 aa13.69□□□□□ -0.22
SNRPF-203ENST00000551316 PPARDQ03181 441 aa13.69□□□□□ -0.22
SNRPF-203ENST00000551316 HLTFQ14527 1009 aaKnown RBP eCLIP13.69□□□□□ -0.22
SNRPF-203ENST00000551316 ZACNQ401N2 412 aa13.69□□□□□ -0.22
SNRPF-203ENST00000551316 ARSIQ5FYB1 569 aa13.69□□□□□ -0.22
SNRPF-203ENST00000551316 VPS36Q86VN1 386 aa13.69□□□□□ -0.22
SNRPF-203ENST00000551316 SLC4A11Q8NBS3 891 aa13.69□□□□□ -0.22
SNRPF-203ENST00000551316 KIAA1143Q96AT1 154 aaPredicted RBP13.69□□□□□ -0.22
SNRPF-203ENST00000551316 CENPTQ96BT3 561 aa13.69□□□□□ -0.22
SNRPF-203ENST00000551316 TNKS2Q9H2K2 1166 aa13.69□□□□□ -0.22
SNRPF-203ENST00000551316 APMAPQ9HDC9 416 aa13.69□□□□□ -0.22
SNRPF-203ENST00000551316 SLC39A1Q9NY26 324 aa13.69□□□□□ -0.22
SNRPF-203ENST00000551316 MAP10Q9P2G4 905 aa13.69□□□□□ -0.22
SNRPF-203ENST00000551316 LRIT1Q9P2V4 623 aa13.69□□□□□ -0.22
SNRPF-203ENST00000551316 B4DGG1 531 aa13.68□□□□□ -0.22
SNRPF-203ENST00000551316 LEFTY1O75610 366 aa13.68□□□□□ -0.22
SNRPF-203ENST00000551316 CPNE6O95741 557 aa13.68□□□□□ -0.22
SNRPF-203ENST00000551316 FYNP06241 537 aa13.68□□□□□ -0.22
SNRPF-203ENST00000551316 TACR2P21452 398 aa13.68□□□□□ -0.22
SNRPF-203ENST00000551316 LONP1P36776 959 aaKnown RBP13.68□□□□□ -0.22
SNRPF-203ENST00000551316 EIF4A3P38919 411 aaKnown RBP13.68□□□□□ -0.22
SNRPF-203ENST00000551316 VASPP50552 380 aaPredicted RBP13.68□□□□□ -0.22
SNRPF-203ENST00000551316 NEK3P51956 506 aa13.68□□□□□ -0.22
SNRPF-203ENST00000551316 PLK1P53350 603 aa13.68□□□□□ -0.22
SNRPF-203ENST00000551316 MAZP56270 477 aaKnown RBP13.68□□□□□ -0.22
SNRPF-203ENST00000551316 KRTAP10-9P60411 292 aa13.68□□□□□ -0.22
SNRPF-203ENST00000551316 CHAF1BQ13112 559 aa13.68□□□□□ -0.22
SNRPF-203ENST00000551316 ERV3-1Q14264 604 aa13.68□□□□□ -0.22
SNRPF-203ENST00000551316 GOLGA7BQ2TAP0 167 aa13.68□□□□□ -0.22
SNRPF-203ENST00000551316 LRRC73Q5JTD7 316 aa13.68□□□□□ -0.22
SNRPF-203ENST00000551316 MCTP1Q6DN14 999 aa13.68□□□□□ -0.22
SNRPF-203ENST00000551316 RD3Q7Z3Z2 195 aa13.68□□□□□ -0.22
SNRPF-203ENST00000551316 CHSY1Q86X52 802 aa13.68□□□□□ -0.22
SNRPF-203ENST00000551316 UNC45BQ8IWX7 931 aa13.68□□□□□ -0.22
SNRPF-203ENST00000551316 FSTL5Q8N475 847 aaPredicted RBP13.68□□□□□ -0.22
SNRPF-203ENST00000551316 AZIN2Q96A70 460 aa13.68□□□□□ -0.22
SNRPF-203ENST00000551316 SLC39A13Q96H72 371 aa13.68□□□□□ -0.22
SNRPF-203ENST00000551316 PSMB7Q99436 277 aa13.68□□□□□ -0.22
SNRPF-203ENST00000551316 SRRTQ9BXP5 876 aaKnown RBP13.68□□□□□ -0.22
SNRPF-203ENST00000551316 ABCC13Q9NSE7 274 aa13.68□□□□□ -0.22
SNRPF-203ENST00000551316 STK17AQ9UEE5 414 aa13.68□□□□□ -0.22
SNRPF-203ENST00000551316 SLC25A13Q9UJS0 675 aa13.68□□□□□ -0.22
SNRPF-203ENST00000551316 P4HA1P13674 534 aa13.67□□□□□ -0.22
SNRPF-203ENST00000551316 GGCXP38435 758 aa13.67□□□□□ -0.22
SNRPF-203ENST00000551316 STAT5AP42229 794 aa13.67□□□□□ -0.22
SNRPF-203ENST00000551316 PIK3CAP42336 1068 aa13.67□□□□□ -0.22
SNRPF-203ENST00000551316 ELOCQ15369 112 aa13.67□□□□□ -0.22
SNRPF-203ENST00000551316 SGSM1Q2NKQ1 1148 aa13.67□□□□□ -0.22
SNRPF-203ENST00000551316 C14orf28Q4W4Y0 310 aa13.67□□□□□ -0.22
SNRPF-203ENST00000551316 CRTC2Q53ET0 693 aaPredicted RBP13.67□□□□□ -0.22
SNRPF-203ENST00000551316 NKAIN2Q5VXU1 208 aa13.67□□□□□ -0.22
SNRPF-203ENST00000551316 LVRNQ6Q4G3 990 aa13.67□□□□□ -0.22
SNRPF-203ENST00000551316 ZNF438Q7Z4V0 828 aa13.67□□□□□ -0.22
SNRPF-203ENST00000551316 FAM129CQ86XR2 697 aa13.67□□□□□ -0.22
SNRPF-203ENST00000551316 FAM184AQ8NB25 1140 aa13.67□□□□□ -0.22
SNRPF-203ENST00000551316 TP53I13Q8NBR0 393 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms