RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 CHRNA5P30532 468 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 SDC4P31431 198 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 IDUAP35475 653 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 IGBP1P78318 339 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 SLC36A3Q495N2 470 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 MFSD4BQ5TF39 518 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 MAP1SQ66K74 1059 aaPredicted RBP12.38□□□□□ -0.43
ERBB3-219ENST00000551242 ABHD15Q6UXT9 468 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 VSIG10LQ86VR7 867 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 TMEM192Q8IY95 271 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 TMCO5AQ8N6Q1 288 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 C12orf29Q8N999 325 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 PCYOX1LQ8NBM8 494 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 ISL2Q96A47 359 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 RPL10LQ96L21 214 aaKnown RBP12.38□□□□□ -0.43
ERBB3-219ENST00000551242 B3GNT5Q9BYG0 378 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 NANOGQ9H9S0 305 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 ATAD3AQ9NVI7 634 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 GGA3Q9NZ52 723 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 VTI1BQ9UEU0 232 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 EGFL7Q9UHF1 273 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 OAZ3Q9UMX2 235 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 AP4E1Q9UPM8 1137 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 NDUFB5O43674 189 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 MPOP05164 745 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 HSPA1AP0DMV8 641 aaKnown RBP12.38□□□□□ -0.43
ERBB3-219ENST00000551242 HSPA1BP0DMV9 641 aaKnown RBP12.38□□□□□ -0.43
ERBB3-219ENST00000551242 YBX3P16989 372 aaKnown RBP eCLIP12.38□□□□□ -0.432e-6■■■□□ 19.2
ERBB3-219ENST00000551242 CSE1LP55060 971 aaKnown RBP12.38□□□□□ -0.43
ERBB3-219ENST00000551242 BFSP2Q13515 415 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 FASTKQ14296 549 aaKnown RBP12.38□□□□□ -0.43
ERBB3-219ENST00000551242 ZNF460Q14592 562 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 KCNJ8Q15842 424 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 DEPDC1Q5TB30 811 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 THOC7Q6I9Y2 204 aaKnown RBP12.38□□□□□ -0.43
ERBB3-219ENST00000551242 SPPL2CQ8IUH8 684 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 NLGN1Q8N2Q7 840 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 MFSD2AQ8NA29 543 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 SLC7A14Q8TBB6 771 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 TOP1MTQ969P6 601 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 VPS39Q96JC1 886 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 GTSE1Q9NYZ3 720 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 HESX1Q9UBX0 185 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 SIX4Q9UIU6 781 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 TCAF1Q9Y4C2 921 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 RIPK3Q9Y572 518 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 SNX9Q9Y5X1 595 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 CPQQ9Y646 472 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 DGKBQ9Y6T7 804 aa12.38□□□□□ -0.43
ERBB3-219ENST00000551242 KIAA1217Q5T5P2 1943 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 MRASO14807 208 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 DLX3O60479 287 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 NCAM1P13591 858 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 GOT1P17174 413 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 EEF1B2P24534 225 aaKnown RBP12.37□□□□□ -0.43
ERBB3-219ENST00000551242 TTKP33981 857 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 SOX11P35716 441 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 OPRL1P41146 370 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 PSMD8P48556 350 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 TRAP1Q12931 704 aaKnown RBP12.37□□□□□ -0.43
ERBB3-219ENST00000551242 STX5Q13190 355 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 GRM3Q14832 879 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 ZNF618Q5T7W0 954 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 NCBP2-AS2Q69YL0 99 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 STYK1Q6J9G0 422 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 RPS27LQ71UM5 84 aaKnown RBP12.37□□□□□ -0.43
ERBB3-219ENST00000551242 ZNF354CQ86Y25 554 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 OR2T34Q8NGX1 318 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 OR2T3Q8NH03 318 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 LRCH3Q96II8 777 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 CSPG4P5Q96PW8 444 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 UPF3AQ9H1J1 476 aaKnown RBP12.37□□□□□ -0.43
ERBB3-219ENST00000551242 FANCEQ9HB96 536 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 PALMDQ9NP74 551 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 CPSF3Q9UKF6 684 aaKnown RBP12.37□□□□□ -0.43
ERBB3-219ENST00000551242 ADAM28Q9UKQ2 775 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 SCAF8Q9UPN6 1271 aaKnown RBP12.37□□□□□ -0.43
ERBB3-219ENST00000551242 RUVBL2Q9Y230 463 aaKnown RBP12.37□□□□□ -0.43
ERBB3-219ENST00000551242 SLC30A1Q9Y6M5 507 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 BRWD3Q6RI45 1802 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 UBR3Q6ZT12 1888 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 TRIM64BA6NI03 449 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 EI24O14681 340 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 OGTO15294 1046 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 CILPO75339 1184 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 CLPXO76031 633 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 PTPN9P43378 593 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 ABRAXAS1Q6UWZ7 409 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 TP53INP2Q8IXH6 220 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 FSTL5Q8N475 847 aaPredicted RBP12.37□□□□□ -0.43
ERBB3-219ENST00000551242 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.37□□□□□ -0.43
ERBB3-219ENST00000551242 CCNYQ8ND76 341 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 SHCBP1Q8NEM2 672 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 P2RY11Q96G91 374 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 CSF3RQ99062 836 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 APOL2Q9BQE5 337 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 C1orf50Q9BV19 199 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 BCO2Q9BYV7 579 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 IL22Q9GZX6 179 aa12.37□□□□□ -0.43
ERBB3-219ENST00000551242 SIAEQ9HAT2 523 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms