RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 DKK2Q9UBU2 259 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 SLC25A10Q9UBX3 287 aaPredicted RBP5.71□□□□□ -1.5
CPSF6-206ENST00000550987 ADAMTS5Q9UNA0 930 aa5.71□□□□□ -1.5
CPSF6-206ENST00000550987 GOLGA6L10A0A0M3HER8 536 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 PIPSLA2A3N6 862 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 GAGE10A6NGK3 116 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 PTP4A3O75365 173 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 CCNDBP1O95273 360 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 CLEC3BP05452 202 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 EGR2P11161 476 aaPredicted RBP5.7□□□□□ -1.5
CPSF6-206ENST00000550987 ZFP36P26651 326 aaKnown RBP5.7□□□□□ -1.5
CPSF6-206ENST00000550987 EPHA8P29322 1005 aaPredicted RBP5.7□□□□□ -1.5
CPSF6-206ENST00000550987 HNF1BP35680 557 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 EPS15P42566 896 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 CPA2P48052 419 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 VPS41P49754 854 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 OAZ1P54368 228 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 SLC37A1P57057 533 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 UFM1P61960 85 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 PSG6Q00889 435 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 CUL4AQ13619 759 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 ZNF766Q5HY98 468 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 LY6G5CQ5SRR4 150 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 SNX30Q5VWJ9 437 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 GPC2Q8N158 579 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 CD99L2Q8TCZ2 262 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 CNOT9Q92600 299 aaKnown RBP5.7□□□□□ -1.5
CPSF6-206ENST00000550987 ELP4Q96EB1 424 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 FMNL2Q96PY5 1086 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 CDK5RAP1Q96SZ6 601 aaKnown RBP5.7□□□□□ -1.5
CPSF6-206ENST00000550987 NPLQ9BXD5 320 aaPredicted RBP5.7□□□□□ -1.5
CPSF6-206ENST00000550987 FTOQ9C0B1 505 aaKnown RBP eCLIP5.7□□□□□ -1.5
CPSF6-206ENST00000550987 RANBP17Q9H2T7 1088 aaKnown RBP5.7□□□□□ -1.5
CPSF6-206ENST00000550987 ZNF703Q9H7S9 590 aaPredicted RBP5.7□□□□□ -1.5
CPSF6-206ENST00000550987 PRKRIP1Q9H875 184 aaPredicted RBP5.7□□□□□ -1.5
CPSF6-206ENST00000550987 TTC12Q9H892 705 aaPredicted RBP5.7□□□□□ -1.5
CPSF6-206ENST00000550987 PCDHB16Q9NRJ7 776 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 SERTAD4Q9NUC0 356 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 IL1RAPL1Q9NZN1 696 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 KCND2Q9NZV8 630 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 TBC1D29Q9UFV1 150 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 OSGIN2Q9Y236 505 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 B3GNT3Q9Y2A9 372 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 REXO2Q9Y3B8 237 aaKnown RBP5.7□□□□□ -1.5
CPSF6-206ENST00000550987 PIAS3Q9Y6X2 628 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 GVINP1Q7Z2Y8 2422 aa5.7□□□□□ -1.5
CPSF6-206ENST00000550987 RIF1Q5UIP0 2472 aaKnown RBP5.69□□□□□ -1.5
CPSF6-206ENST00000550987 MYO9AB2RTY4 2548 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 TEX13CA0A0J9YWL9 993 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 NPIPB13A6NJU9 1138 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 FAM90A7PA6NKC0 464 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 NPIPB5A8MRT5 1133 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 FAM90A22PA8MWA6 464 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 FAM90A12PA8MX19 464 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 FAM90A23PA8MXZ1 464 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 TEX22C9J3V5 150 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 NPIPB4C9JG80 1138 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 K7ESM1 405 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 FYB1O15117 783 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 EXOC3O60645 756 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 KAT7O95251 611 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 ALDOCP09972 364 aaKnown RBP5.69□□□□□ -1.5
CPSF6-206ENST00000550987 COX7A2P14406 83 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 PKMP14618 531 aaKnown RBP5.69□□□□□ -1.5
CPSF6-206ENST00000550987 HOXB9P17482 250 aaPredicted RBP5.69□□□□□ -1.5
CPSF6-206ENST00000550987 PRPH2P23942 346 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 AVPR2P30518 371 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 ARL1P40616 181 aaPredicted RBP5.69□□□□□ -1.5
CPSF6-206ENST00000550987 MLH1P40692 756 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 MVDP53602 400 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 WDR5P61964 334 aaKnown RBP5.69□□□□□ -1.5
CPSF6-206ENST00000550987 CFHR3Q02985 330 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 TFF2Q03403 129 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 PTP4A2Q12974 167 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 BYSLQ13895 437 aaKnown RBP5.69□□□□□ -1.5
CPSF6-206ENST00000550987 WTAPQ15007 396 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 AP5B1Q2VPB7 878 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 SH2D4BQ5SQS7 431 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 TMEM63BQ5T3F8 832 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 ANKRD16Q6P6B7 361 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 INO80CQ6PI98 192 aaPredicted RBP5.69□□□□□ -1.5
CPSF6-206ENST00000550987 LCNL1Q6ZST4 164 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 ENOSF1Q7L5Y1 443 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 PXKQ7Z7A4 578 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 RPAP2Q8IXW5 612 aaPredicted RBP5.69□□□□□ -1.5
CPSF6-206ENST00000550987 ADSSL1Q8N142 457 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 PROKR1Q8TCW9 393 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 TBC1D5Q92609 795 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 USP6NLQ92738 828 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 ZKSCAN4Q969J2 545 aaPredicted RBP5.69□□□□□ -1.5
CPSF6-206ENST00000550987 EDC3Q96F86 508 aaKnown RBP5.69□□□□□ -1.5
CPSF6-206ENST00000550987 ERO1AQ96HE7 468 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 GPR78Q96P69 363 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 ABHD14AQ9BUJ0 271 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.69□□□□□ -1.5
CPSF6-206ENST00000550987 HDHD5Q9BXW7 423 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 SEMA4BQ9NPR2 832 aaPredicted RBP5.69□□□□□ -1.5
CPSF6-206ENST00000550987 ANKEF1Q9NU02 776 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 NKIRAS2Q9NYR9 191 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 LRIT1Q9P2V4 623 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms