RNA–Protein interactions for RNA: ENST00000550678.1

LINC02388-201, Transcript of long intergenic non-protein coding RNA 2388, humanhuman

TSL 2 BASIC

Gene LINC02388, Length 1,975 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02388-201ENST00000550678 TMEM114B3SHH9 223 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 E7EWF7 191 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 RNF103O00237 685 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 SLC9A3R1O14745 358 aaPredicted RBP6.55□□□□□ -1.36
LINC02388-201ENST00000550678 TO15178 435 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 SPAG6O75602 509 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 PGLSO95336 258 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 PTBP3O95758 552 aaKnown RBP6.55□□□□□ -1.36
LINC02388-201ENST00000550678 KRT6AP02538 564 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 KRT6BP04259 564 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 PYGMP11217 842 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 TYMPP19971 482 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 POU3F2P20265 443 aaPredicted RBP6.55□□□□□ -1.36
LINC02388-201ENST00000550678 CCNE1P24864 410 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 CTSSP25774 331 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 SLC1A1P43005 524 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 PTGER3P43115 390 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 PIP4K2AP48426 406 aaPredicted RBP6.55□□□□□ -1.36
LINC02388-201ENST00000550678 TMED10P49755 219 aaKnown RBP6.55□□□□□ -1.36
LINC02388-201ENST00000550678 DNM2P50570 870 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 PMP22Q01453 160 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 CLCQ05315 142 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 KYNUQ16719 465 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 CNPY1Q3B7I2 92 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 RARS2Q5T160 578 aaKnown RBP6.55□□□□□ -1.36
LINC02388-201ENST00000550678 BTBD8Q5XKL5 378 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 DENND5AQ6IQ26 1287 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 TMCO2Q7Z6W1 182 aaPredicted RBP6.55□□□□□ -1.36
LINC02388-201ENST00000550678 TUSC5Q8IXB3 177 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 SRRM1Q8IYB3 904 aaKnown RBP6.55□□□□□ -1.36
LINC02388-201ENST00000550678 ENDOVQ8N8Q3 282 aaKnown RBP6.55□□□□□ -1.36
LINC02388-201ENST00000550678 C19orf47Q8N9M1 422 aaKnown RBP6.55□□□□□ -1.36
LINC02388-201ENST00000550678 ICA1LQ8NDH6 482 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 TRPV3Q8NET8 790 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 HEXDCQ8WVB3 486 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 IQCDQ96DY2 449 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 PIWIL1Q96J94 861 aaKnown RBP6.55□□□□□ -1.36
LINC02388-201ENST00000550678 RAB3IPQ96QF0 476 aaPredicted RBP6.55□□□□□ -1.36
LINC02388-201ENST00000550678 RAD9AQ99638 391 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 TM9SF2Q99805 663 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 APOL6Q9BWW8 343 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 UNC93B1Q9H1C4 597 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 RIBC2Q9H4K1 309 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 OPA3Q9H6K4 179 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 EVA1AQ9H8M9 152 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 NHEJ1Q9H9Q4 299 aaPredicted RBP6.55□□□□□ -1.36
LINC02388-201ENST00000550678 SLC35C2Q9NQQ7 365 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 AGPAT5Q9NUQ2 364 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 CYP39A1Q9NYL5 469 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 DBF4Q9UBU7 674 aaPredicted RBP6.55□□□□□ -1.36
LINC02388-201ENST00000550678 CLCA2Q9UQC9 943 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 ERGIC3Q9Y282 383 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 PCDHGA8Q9Y5G5 932 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 GPR45Q9Y5Y3 372 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 NUMBLQ9Y6R0 609 aa6.55□□□□□ -1.36
LINC02388-201ENST00000550678 BCL9O00512 1426 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 A0A1W2PQC6 194 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 MEX3AA1L020 520 aaKnown RBP6.54□□□□□ -1.36
LINC02388-201ENST00000550678 ERVV-1B6SEH8 477 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 PRSS44E7EML9 344 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 H3BM21 787 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 TRIM77I1YAP6 450 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 PGRMC1O00264 195 aaKnown RBP6.54□□□□□ -1.36
LINC02388-201ENST00000550678 PCDHGA12O60330 932 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 FTCDO95954 541 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 OAS1P00973 400 aaKnown RBP6.54□□□□□ -1.36
LINC02388-201ENST00000550678 TPOP07202 933 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 CHRM5P08912 532 aaPredicted RBP6.54□□□□□ -1.36
LINC02388-201ENST00000550678 ARP10275 920 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 SLC7A1P30825 629 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 CXCR5P32302 372 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 SHMT1P34896 483 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 ERFP50548 548 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 ZNF41P51814 821 aaPredicted RBP6.54□□□□□ -1.36
LINC02388-201ENST00000550678 CACNA2D1P54289 1103 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 PEX3P56589 373 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 CYP27A1Q02318 531 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 GPM6BQ13491 265 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 KCNAB1Q14722 419 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 PDK1Q15118 436 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 CYTH1Q15438 398 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 SMU1Q2TAY7 513 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 ANKRD20A4Q4UJ75 823 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 TCP11X2Q5H9J9 407 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 NBPF12Q5TAG4 269 aaPredicted RBP6.54□□□□□ -1.36
LINC02388-201ENST00000550678 KLHL24Q6TFL4 600 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 RRAGAQ7L523 313 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 TAF8Q7Z7C8 310 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 USP37Q86T82 979 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 TICAM1Q8IUC6 712 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 SCUBE3Q8IX30 993 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 NELFCDQ8IXH7 590 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 LIX1Q8N485 282 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 KLHL36Q8N4N3 616 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 ARFGAP1Q8N6T3 406 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 GALNT11Q8NCW6 608 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 STKLD1Q8NE28 680 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 SRFBP1Q8NEF9 429 aaKnown RBP6.54□□□□□ -1.36
LINC02388-201ENST00000550678 FIBINQ8TAL6 211 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 DEPDC1BQ8WUY9 529 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms